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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Autism Corneal injury
1 gene
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1 of 1 corroborated by 2+ sources
ALDH3A1(2)
0.001 1.000 9.50e-2 9.60e-2 —
Autism Deafness, y-linked
1 gene
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1 of 1 corroborated by 2+ sources
TBL1Y(4)
0.001 1.000 9.50e-2 9.60e-2 Cluster 2 →
Autism Paraparesis
1 gene
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1 of 1 corroborated by 2+ sources
TECPR2(2)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 10
1 gene
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1 of 1 corroborated by 2+ sources
DNAAF2(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 11
1 gene
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1 of 1 corroborated by 2+ sources
RSPH4A(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 13
1 gene
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1 of 1 corroborated by 2+ sources
DNAAF1(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 14
1 gene
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1 of 1 corroborated by 2+ sources
CCDC39(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 20
1 gene
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1 of 1 corroborated by 2+ sources
ODAD1(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism primary ciliary dyskinesia 9
1 gene
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1 of 1 corroborated by 2+ sources
DNAI2(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism Thiopurine s-methyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TPMT(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism X-linked epilepsy with or without intellectual disability and dysmorphic features
1 gene
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1 of 1 corroborated by 2+ sources
GABRA3(5)
0.001 1.000 9.50e-2 9.60e-2 —
Autism X-linked hereditary motor and sensory neuropathy
1 gene
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DRP2(1)
0.001 1.000 9.50e-2 9.60e-2 —
Autism Hemorrhagic destruction of the brain subependymal calcification and cataracts
1 gene
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1 of 1 corroborated by 2+ sources
JAM3(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism hypotonia, infantile, with psychomotor retardation and characteristic facies 2
1 gene
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1 of 1 corroborated by 2+ sources
UNC80(3)
0.001 1.000 9.50e-2 9.60e-2 —
2-methylbutyryl-coa dehydrogenase deficiency Autism
1 gene
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1 of 1 corroborated by 2+ sources
ACADSB(5)
0.001 1.000 9.50e-2 9.60e-2 —
Adenylosuccinate lyase deficiency Autism
1 gene
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1 of 1 corroborated by 2+ sources
ADSL(4)
0.001 1.000 9.50e-2 9.60e-2 —
Al kaissi syndrome Autism
1 gene
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CDK10(1)
0.001 1.000 9.50e-2 9.60e-2 —
Aminoaciduria Autism
1 gene
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CLTRN(1)
0.001 1.000 9.50e-2 9.60e-2 —
Autism Cohen-gibson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EED(6)
0.001 1.000 9.50e-2 9.60e-2 —
Autism congenital disorder of glycosylation, type Iw, autosomal dominant
1 gene
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1 of 1 corroborated by 2+ sources
STT3A(2)
0.001 1.000 9.50e-2 9.60e-2 —
Autism macular corneal dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
CHST6(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism megalencephalic leukoencephalopathy with subcortical cysts 2a
1 gene
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1 of 1 corroborated by 2+ sources
HEPACAM(2)
0.001 1.000 9.50e-2 9.60e-2 —
Autism megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability
1 gene
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1 of 1 corroborated by 2+ sources
HEPACAM(2)
0.001 1.000 9.50e-2 9.60e-2 —
Autism methylmalonate semialdehyde dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ALDH6A1(3)
0.001 1.000 9.50e-2 9.60e-2 —
Autism mucopolysaccharidosis type 4A
1 gene
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1 of 1 corroborated by 2+ sources
GALNS(3)
0.001 1.000 9.50e-2 9.60e-2 —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.