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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Burn-mckeown syndrome Cardiovascular disease
1 gene
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1 of 1 corroborated by 2+ sources
POLR1A(3)
0.002 0.500 5.53e-2 5.70e-2 —
Cardiovascular disease Keratosis palmoplantaris papulosa
1 gene
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1 of 1 corroborated by 2+ sources
AAGAB(3)
0.002 0.500 5.53e-2 5.70e-2 —
Cardiovascular disease Periventricular leukomalacia
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHG1(2)
0.002 0.500 5.53e-2 5.70e-2 —
Cardiovascular disease Thyroid hemiagenesis
1 gene
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1 of 1 corroborated by 2+ sources
PSMD3(2)
0.002 0.500 5.53e-2 5.70e-2 —
Atrial fibrillation Webb-dattani syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ARNT2(5)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Yuksel-vogel-bauer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DLG5(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation cardiomyopathy, dilated, 2d
1 gene
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1 of 1 corroborated by 2+ sources
RPL3L(4)
0.001 1.000 5.60e-2 5.77e-2 —
5-oxoprolinase deficiency Atrial fibrillation
1 gene
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OPLAH(1)
0.001 1.000 5.60e-2 5.77e-2 —
Absence of fingerprints-congenital milia syndrome Atrial fibrillation
1 gene
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0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Hemorrhagic destruction of the brain subependymal calcification and cataracts
1 gene
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1 of 1 corroborated by 2+ sources
JAM3(4)
0.001 1.000 5.60e-2 5.77e-2 Cluster 78 →
Atrial fibrillation hermansky-pudlak syndrome 6
1 gene
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1 of 1 corroborated by 2+ sources
HPS6(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Hoxha-aliu syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ERI1(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation hyperphenylalaninemia due to DNAJC12 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
DNAJC12(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Rhizomelic dysplasia, ain-naz type
1 gene
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1 of 1 corroborated by 2+ sources
GNPNAT1(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation myopathy, centronuclear, 5
1 gene
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1 of 1 corroborated by 2+ sources
SPEG(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation nemaline myopathy 7
1 gene
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1 of 1 corroborated by 2+ sources
CFL2(4)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation nephronophthisis 20
1 gene
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1 of 1 corroborated by 2+ sources
MAPKBP1(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation neurodegenerative disease
1 gene
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1 of 1 corroborated by 2+ sources
IRF2BPL(3)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation non-severe combined immunodeficiency due to COPG1 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
COPG1(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation polyglucosan body myopathy type 2
1 gene
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1 of 1 corroborated by 2+ sources
GYG1(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation pseudohypoaldosteronism type 2D
1 gene
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1 of 1 corroborated by 2+ sources
KLHL3(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation radio-tartaglia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SPEN(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation Regressive neurodevelopmental disorder dystonia seizures
1 gene
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1 of 1 corroborated by 2+ sources
IRF2BPL(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation immunoskeletal dysplasia with neurodevelopmental abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
EXTL3(2)
0.001 1.000 5.60e-2 5.77e-2 —
Atrial fibrillation inherited blood coagulation disorder
1 gene
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1 of 1 corroborated by 2+ sources
APOLD1(2)
0.001 1.000 5.60e-2 5.77e-2 —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.