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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Appendiceal disorder Premature ovarian failure
1 gene
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1 of 1 corroborated by 2+ sources
MND1(2)
0.008 0.250 2.93e-2 3.11e-2 ✓ sig. —
Ileocolitis Ocular sarcoidosis
1 gene
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MAGI1(1)
0.015 0.125 2.97e-2 3.16e-2 ✓ sig. —
Dental caries Intestinal vascular insufficiency
1 gene
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NEDD9(1)
0.004 0.500 2.98e-2 3.17e-2 ✓ sig. —
Dental caries Smith-mccort dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
DYM(6)
0.004 0.500 2.98e-2 3.17e-2 ✓ sig. —
Candle syndrome Dental caries
1 gene
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1 of 1 corroborated by 2+ sources
PSMB8(2)
0.004 0.500 2.98e-2 3.17e-2 ✓ sig. —
Epilepsy Lewis lung carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
TXNRD1(2)
0.004 0.500 3.00e-2 3.19e-2 ✓ sig. —
Congenital stromal corneal dystrophy Epilepsy
1 gene
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1 of 1 corroborated by 2+ sources
SPARCL1(3)
0.004 0.500 3.00e-2 3.19e-2 ✓ sig. —
Butyryl-coa dehydrogenase deficiency Obsessive-compulsive disorder
1 gene
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1 of 1 corroborated by 2+ sources
ACADS(3)
0.004 0.500 3.02e-2 3.21e-2 ✓ sig. —
Obsessive-compulsive disorder Trichotillomania
1 gene
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1 of 1 corroborated by 2+ sources
HOXB8(2)
0.004 0.500 3.02e-2 3.21e-2 ✓ sig. —
CTR9-related neurodevelopmental disorder Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
CTR9(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
Deafness, encephaloneuropathy, obesity, valvulopathy syndrome Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
PDSS1(4)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
12q15q21 microdeletion syndrome Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
CNOT2(3)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
fanconi anemia complementation group e Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
FANCE(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
ciliary dyskinesia, primary, 42 Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
MCIDAS(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
ciliary dyskinesia, primary, 53 Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
CLXN(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
BARD1-related cancer predisposition Ovarian cancer
1 gene
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BARD1(1)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
maternal riboflavin deficiency Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
SLC52A1(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
Ovarian cancer Riboflavin deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SLC52A1(4)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
Intellectual developmental disorder dysmorphic skeletal Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
CNOT2(4)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
Intellectual developmental disorder dysmorphic speech skeletal Ovarian cancer
1 gene
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1 of 1 corroborated by 2+ sources
CNOT2(2)
0.002 1.000 3.03e-2 3.21e-2 ✓ sig. —
Chung-jansen syndrome Heart failure
1 gene
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1 of 1 corroborated by 2+ sources
PHIP(2)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Congenital right-sided heart lesions Heart failure
1 gene
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SLC27A6(1)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Heart failure Yoon-bellen neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
OGDHL(4)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
fontaine progeroid syndrome Heart failure
1 gene
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1 of 1 corroborated by 2+ sources
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —
Developmental delay with intellectual disability and obesity Heart failure
1 gene
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1 of 1 corroborated by 2+ sources
PHIP(2)
0.002 1.000 3.05e-2 3.24e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.