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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Androgenetic alopecia Retrograde amnesia
1 gene
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1 of 1 corroborated by 2+ sources
PREP(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia Rhizomelic limb shortening with dysmorphic features
1 gene
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1 of 1 corroborated by 2+ sources
PKDCC(5)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia scalp-ear-nipple syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KCTD1(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia Seizures, scoliosis, and macrocephaly/microcephaly syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EXT2(5)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome
1 gene
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1 of 1 corroborated by 2+ sources
GATAD2B(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia syndromic multisystem autoimmune disease due to ITCH deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ITCH(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
16p13.2 microdeletion syndrome Androgenetic alopecia
1 gene
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1 of 1 corroborated by 2+ sources
USP7(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Absence of fingerprints-congenital milia syndrome Androgenetic alopecia
1 gene
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0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
amyotrophic lateral sclerosis type 15 Androgenetic alopecia
1 gene
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1 of 1 corroborated by 2+ sources
UBQLN2(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia ectodermal dysplasia 10b, hypohidrotic/hair/tooth type, autosomal recessive
1 gene
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1 of 1 corroborated by 2+ sources
EDAR(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia bamforth-lazarus syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FOXE1(2)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Androgenetic alopecia Perlman syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DIS3L2(5)
0.002 1.000 2.65e-2 2.83e-2 ✓ sig. —
Renal cell carcinoma X-linked syndromic complex neurodevelopmental disorder
1 gene
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1 of 1 corroborated by 2+ sources
TFE3(2)
0.007 0.333 2.68e-2 2.86e-2 ✓ sig. —
3m syndrome Renal cell carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
CUL7(5)
0.007 0.333 2.68e-2 2.86e-2 ✓ sig. —
Hyperlipidemia Salt-sensitive hypertension
1 gene
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ADD1(1)
0.007 0.333 2.72e-2 2.90e-2 ✓ sig. —
Kidney disease renal-hepatic-pancreatic dysplasia 2
1 gene
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1 of 1 corroborated by 2+ sources
NEK8(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease spinocerebellar ataxia, autosomal recessive 28
1 gene
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1 of 1 corroborated by 2+ sources
THG1L(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease Peho-like syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CCDC88A(5)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. Cluster 139 →
Kidney disease polycystic kidney disease 3 with or without polycystic liver disease
1 gene
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1 of 1 corroborated by 2+ sources
GANAB(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease RD3-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RD3(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
glycogen storage disease III Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
AGL(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Intellectual developmental disorder dysmorphic facial hearing joint Kidney disease
1 gene
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1 of 1 corroborated by 2+ sources
TET3(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease kidney disorder
1 gene
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1 of 1 corroborated by 2+ sources
SLC41A1(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease membranoproliferative glomerulonephritis
1 gene
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1 of 1 corroborated by 2+ sources
DGKE(2)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —
Kidney disease nephronophthisis 7
1 gene
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1 of 1 corroborated by 2+ sources
GLIS2(3)
0.002 1.000 2.76e-2 2.94e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.