Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Hypothyroidism Thrombocytopenia with anemia and myelofibrosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
MPIG6B(6)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Hypothyroidism Winkelman bethge pfeiffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
LHX3(4)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Congenital primary lymphedema of gordon Hypothyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
VEGFC(3)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Helsmoortel-van der aa syndrome Hypothyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADNP(3)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Hypothyroidism Intellectual developmental disorder growth microcephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
CTCF(2)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Carnitine palmitoyltransferase deficiency Vitiligo
1 gene
Show details
1 of 1 corroborated by 2+ sources
CPT1A(7)
0.008 0.333 2.43e-2 2.61e-2 ✓ sig. —
Endometriosis Parathyroid carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDC73(4)
0.003 1.000 2.44e-2 2.61e-2 ✓ sig. —
Endometriosis Parathyroid neoplasm
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDC73(3)
0.003 1.000 2.44e-2 2.61e-2 ✓ sig. —
Endometriosis Genetic syndromic pierre robin syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EFTUD2(2)
0.003 1.000 2.44e-2 2.61e-2 ✓ sig. —
Endometriosis hyperparathyroidism 2 with jaw tumors
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDC73(2)
0.003 1.000 2.44e-2 2.61e-2 ✓ sig. —
Endometriosis neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR2A(2)
0.003 1.000 2.44e-2 2.61e-2 ✓ sig. —
Cerebral atherosclerosis Esophageal atresia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TENT5A(2)
0.023 0.083 2.47e-2 2.64e-2 ✓ sig. —
Angiokeratoma Vascular dementia
1 gene
Show details
KRIT1(1)
0.008 0.333 2.47e-2 2.65e-2 ✓ sig. —
Ochoa syndrome Peripheral neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPSE2(2)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —
Giant axonal neuropathy Peripheral neuropathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GAN(7)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. Cluster 243 →
Peripheral neuropathy Trichotillomania
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLITRK1(5)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —
Peripheral neuropathy Urofacial syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPSE2(5)
0.005 0.500 2.48e-2 2.65e-2 ✓ sig. —
Celiac disease Degenerative polyarthritis
1 gene
Show details
1 of 1 corroborated by 2+ sources
TLR8(2)
0.005 0.500 2.49e-2 2.67e-2 ✓ sig. —
Cerebral artery occlusion Esophageal squamous cell carcinoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADCYAP1(2)
0.008 0.333 2.49e-2 2.67e-2 ✓ sig. —
Contiguous abcd1-dxs1375e deletion syndrome Hearing loss
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCAP31(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss perrault syndrome 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
HARS2(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss PHARC syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ABHD12(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss POLR1C-related disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR1C(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss purine nucleoside phosphorylase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
PNP(2)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —
Hearing loss Microtia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA2(3)
0.003 1.000 2.51e-2 2.69e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.