Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Global developmental delay SMARCC1-associated developmental dysgenesis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SMARCC1(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay immunodeficiency 78 with autoimmunity and developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
TPP2(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Inflammatory demyelinating polyneuropathy Open angle glaucoma
1 gene
Show details
CNBD1(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Intellectual developmental disorder dysmorphic hypotonia
1 gene
Show details
1 of 1 corroborated by 2+ sources
KMT5B(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Intellectual developmental disorder dysmorphic ocular
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTSS2(3)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Global developmental delay Intellectual developmental disorder growth behavioral
1 gene
Show details
PPP2R5D(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Intellectual developmental disorder macrocephaly hypotonia behavioral
1 gene
Show details
1 of 1 corroborated by 2+ sources
PPP2R5D(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Intellectual developmental disorder speech ambulation
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTL6B(3)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Kidney atrophy
1 gene
Show details
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Growth retardation, impaired intellectual development, hypotonia, and hepatopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
IARS1(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Global developmental delay hawkinsinuria
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPD(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay hearing loss, autosomal recessive 119
1 gene
Show details
1 of 1 corroborated by 2+ sources
AFG2B(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
hearing loss, autosomal recessive 120 Open angle glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MINAR2(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Helsmoortel-van der aa syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADNP(3)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Global developmental delay Hemiparkinsonism hemiatrophy syndrome
1 gene
Show details
H3-3B(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Hoxha-aliu syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERI1(3)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay hypotonia, infantile, with psychomotor retardation and characteristic facies 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
UNC80(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Contiguous abcd1-dxs1375e deletion syndrome Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCAP31(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Cutis marmorata Global developmental delay
1 gene
Show details
TPP2(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Deeah syndrome Open angle glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
MADD(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 240 →
Global developmental delay Parenti-mignot neurodevelopmental syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CHD5(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Regressive neurodevelopmental disorder dystonia seizures
1 gene
Show details
IRF2BPL(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Hypothyroidism Midline facial cleft
1 gene
Show details
1 of 1 corroborated by 2+ sources
PCSK7(2)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. Cluster 28 →
Allan-herndon-dudley syndrome Hypothyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A2(4)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —
Genetic transient congenital hypothyroidism Hypothyroidism
1 gene
Show details
1 of 1 corroborated by 2+ sources
DUOX2(3)
0.003 1.000 2.43e-2 2.60e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.