Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Congenital heart defect, intellectual disability, facial dysmorphism syndrome Global developmental delay
1 gene
Show details
CDK13(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Brainstem dysplasia Global developmental delay
1 gene
Show details
SMG9(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Global developmental delay Malan syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFIX(6)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay marshall-smith syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
NFIX(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay MGAT2-congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
MGAT2(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
autosomal recessive spinocerebellar ataxia 20 Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
SNX14(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Bafopathy Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTL6A(3)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
basilicata-akhtar syndrome Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
MSL3(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Beta-hexosaminidase a deficiency Global developmental delay
1 gene
Show details
HEXA(1)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
developmental and epileptic encephalopathy, 77 Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIGQ(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Developmental delay with behavioral abnormalities Global developmental delay
1 gene
Show details
1 of 1 corroborated by 2+ sources
ADGRL1(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay neurodegeneration, childhood-onset, with cerebellar atrophy
1 gene
Show details
1 of 1 corroborated by 2+ sources
AGTPBP1(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay neurodegenerative disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
IRF2BPL(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay neurodevelopmental disorder with hypotonia, neuropathy, and deafness
1 gene
Show details
1 of 1 corroborated by 2+ sources
SPTBN4(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay neurodevelopmental disorder with or without variable brain abnormalities; NEDBA
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Global developmental delay neurodevelopmental disorder with severe motor impairment and absent language
1 gene
Show details
1 of 1 corroborated by 2+ sources
DHX30(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
neurodevelopmental disorder, nonprogressive, with spasticity and transient opisthotonus Open angle glaucoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
TNR(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 240 →
Global developmental delay optic atrophy 10 with or without ataxia, intellectual disability, and seizures
1 gene
Show details
1 of 1 corroborated by 2+ sources
RTN4IP1(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Otofacial neurodevelopmental syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ZSCAN10(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. Cluster 6 →
Open angle glaucoma Rothmund-Thomson syndrome type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
ANAPC1(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay schuurs-hoeijmakers syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PACS1(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay seckel syndrome 10
1 gene
Show details
1 of 1 corroborated by 2+ sources
NSMCE2(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Sensorineural hearing loss-spastic quadriplegia–intellectual disability
1 gene
Show details
1 of 1 corroborated by 2+ sources
AFG2B(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay severe motor and intellectual disabilities-sensorineural deafness-dystonia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCAP31(2)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —
Global developmental delay Shukla-vernon syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCORL1(4)
0.003 1.000 2.40e-2 2.58e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.