Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Astrocytoma scalp-ear-nipple syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KCTD1(2)
0.003 1.000 1.95e-2 2.13e-2 ✓ sig. —
Astrocytoma Compton-north congenital myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CNTN1(2)
0.003 1.000 1.95e-2 2.13e-2 ✓ sig. —
Astrocytoma Congenital lethal myopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CNTN1(3)
0.003 1.000 1.95e-2 2.13e-2 ✓ sig. —
Astrocytoma thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAP1B(2)
0.003 1.000 1.95e-2 2.13e-2 ✓ sig. Cluster 284 →
Birt-hogg-dube syndrome Liver neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLCN(7)
0.006 0.500 1.96e-2 2.14e-2 ✓ sig. —
Fructokinase deficiency Liver neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
CGREF1(2)
0.006 0.500 1.96e-2 2.14e-2 ✓ sig. —
Combined immunodeficiency disease Epidermodysplasia verruciformis
1 gene
Show details
MST1(1)
0.020 0.143 1.98e-2 2.16e-2 ✓ sig. —
dyskeratosis congenita, autosomal recessive 3 Uterine fibroid
1 gene
Show details
1 of 1 corroborated by 2+ sources
WRAP53(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Bilateral microtia with deafness and cleft palate syndrome Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA2(5)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities Uterine fibroid
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR2A(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
autoimmune lymphoproliferative syndrome type 2A Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
CASP10(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
autosomal dominant combined immunodeficiency due to ERBIN deficiency Uterine fibroid
1 gene
Show details
1 of 1 corroborated by 2+ sources
ERBIN(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Autosomal recessive hypomyelinating leukodystrophy Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
HIKESHI(4)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
leukodystrophy, hypomyelinating, 21 Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
POLR3K(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome Uterine fibroid
1 gene
Show details
1 of 1 corroborated by 2+ sources
CDC42(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Microtia Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
HOXA2(3)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
mitochondrial short-chain enoyl-coa hydratase 1 deficiency Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
ECHS1(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Stomach neoplasms White-kernohan syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
DDB1(5)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Hereditary arterial and articular multiple calcification syndrome Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
NT5E(4)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
hereditary fructose intolerance Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALDOB(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
hypomyelinating leukodystrophy 13 Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
HIKESHI(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
IDH3B-related retinopathy Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
IDH3B(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
Retrograde amnesia Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
PREP(2)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. —
extraoral halitosis due to methanethiol oxidase deficiency Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. Cluster 5 →
Cerebellar ataxia, brain abnormalities, and cardiac conduction defects Stomach neoplasms
1 gene
Show details
1 of 1 corroborated by 2+ sources
EXOSC5(5)
0.003 1.000 1.99e-2 2.16e-2 ✓ sig. Cluster 5 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.