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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Diverticular disease pseudohypoaldosteronism type 2E
1 gene
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1 of 1 corroborated by 2+ sources
CUL3(2)
0.004 1.000 1.62e-2 1.78e-2 ✓ sig. —
Chromosome 12p deletion syndrome Diverticular disease
1 gene
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1 of 1 corroborated by 2+ sources
ERC1(3)
0.004 1.000 1.62e-2 1.78e-2 ✓ sig. —
Diverticular disease immunodeficiency 106, susceptibility to viral infections
1 gene
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1 of 1 corroborated by 2+ sources
IFNAR1(2)
0.004 1.000 1.62e-2 1.78e-2 ✓ sig. —
Diverticular disease joubert syndrome 30
1 gene
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1 of 1 corroborated by 2+ sources
ARMC9(2)
0.004 1.000 1.62e-2 1.78e-2 ✓ sig. —
Diverticular disease FADD-related immunodeficiency
1 gene
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1 of 1 corroborated by 2+ sources
FADD(3)
0.004 1.000 1.62e-2 1.78e-2 ✓ sig. —
Childhood-onset basal ganglia degeneration syndrome Pancreatic cancer
1 gene
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1 of 1 corroborated by 2+ sources
VAC14(3)
0.004 1.000 1.62e-2 1.79e-2 ✓ sig. —
Autoimmune nervous system disorder Mouth neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
ANXA5(2)
0.015 0.250 1.63e-2 1.79e-2 ✓ sig. —
Beta-ketothiolase deficiency Kidney failure
1 gene
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1 of 1 corroborated by 2+ sources
ACAT1(5)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa Hip dislocation-facial dysmorphism syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TRIM33(3)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
SHMT2(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. Cluster 69 →
A4GALT-congenital disorder of glycosylation Kidney failure
1 gene
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1 of 1 corroborated by 2+ sources
A4GALT(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Acromelic frontonasal dysostosis Anorexia nervosa
1 gene
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1 of 1 corroborated by 2+ sources
ZSWIM6(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Amaurosis hypertrichosis Anorexia nervosa
1 gene
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1 of 1 corroborated by 2+ sources
CNNM4(3)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa Birk-landau-perez syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(3)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Brainstem atrophy Kidney failure
1 gene
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MCOLN1(1)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa cardiomyopathy, dilated, 2f
1 gene
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1 of 1 corroborated by 2+ sources
BAG5(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. Cluster 69 →
Anorexia nervosa focal segmental glomerulosclerosis and neurodevelopmental syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TRIM8(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa short chain acyl-coa dehydrogenase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ACADS(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Dalmatian hypouricemia Kidney failure
1 gene
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1 of 1 corroborated by 2+ sources
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa jalili syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CNNM4(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa KIZ-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
KIZ(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa pseudohypoaldosteronism type 2E
1 gene
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1 of 1 corroborated by 2+ sources
CUL3(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa psychomotor regression-oculomotor apraxia-movement disorder-nephropathy syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SLC30A9(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Kidney failure RD3-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RD3(2)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —
Anorexia nervosa Diets-jongmans syndrome
1 gene
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1 of 1 corroborated by 2+ sources
KDM3B(5)
0.004 1.000 1.63e-2 1.79e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.