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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Cataract Hyperbiliverdinemia
1 gene
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1 of 1 corroborated by 2+ sources
BLVRA(7)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Prolidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
PEPD(3)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Proximal renal tubular acidosis
1 gene
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1 of 1 corroborated by 2+ sources
SLC4A4(4)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract methylmalonic aciduria, cblb type
1 gene
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1 of 1 corroborated by 2+ sources
MMAB(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Corneal injury
1 gene
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ALDH3A1(1)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Baralle-macken syndrome Cataract
1 gene
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1 of 1 corroborated by 2+ sources
COPB1(4)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract nance-horan syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NHS(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. Cluster 43 →
Cataract Transaldolase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TALDO1(6)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Uterine benign neoplasm
1 gene
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BET1L(1)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Congenital cataract severe neonatal hepatopathy developmental delay syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CYP51A1(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. Cluster 43 →
Cataract Cataract-growth hormone deficiency-skeletal dysplasia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
IARS2(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Cataract Cataract-microcornea-metabolic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
anterior segment dysgenesis 8 Cataract
1 gene
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1 of 1 corroborated by 2+ sources
CPAMD8(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Ataxia, spastic, autosomal recessive Hereditary spastic paraplegia
1 gene
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1 of 1 corroborated by 2+ sources
KIF1C(2)
0.010 0.500 1.31e-2 1.46e-2 ✓ sig. —
Congenital cataract hearing loss developmental delay syndrome Hereditary spastic paraplegia
1 gene
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1 of 1 corroborated by 2+ sources
SLC33A1(2)
0.010 0.500 1.31e-2 1.46e-2 ✓ sig. —
Cardioembolic stroke Wiskott-aldrich syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WIPF1(6)
0.010 0.500 1.31e-2 1.46e-2 ✓ sig. —
Autoimmune disease syndromic multisystem autoimmune disease due to ITCH deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ITCH(3)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Autoimmune disease combined immunodeficiency due to OX40 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
TNFRSF4(2)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Autoimmune disease Autoinflammation and autoimmunity, systemic, with immune dysregulation 1
1 gene
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COPA(1)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Autoimmune disease Autoinflammation with pulmonary and cutaneous vasculitis
1 gene
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1 of 1 corroborated by 2+ sources
HCK(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. Cluster 39 →
Autoimmune disease Autoinflammation, immune dysregulation, and eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
JAK1(5)
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Autoimmune disease autosomal systemic lupus erythematosus type 16
1 gene
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1 of 1 corroborated by 2+ sources
0.005 1.000 1.31e-2 1.46e-2 ✓ sig. —
Autoinflammatory disease, systemic, with vasculitis Iga nephropathy
1 gene
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1 of 1 corroborated by 2+ sources
LYN(4)
0.005 1.000 1.32e-2 1.47e-2 ✓ sig. Cluster 28 →
autosomal recessive osteopetrosis 6 Post-traumatic stress disorder
1 gene
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1 of 1 corroborated by 2+ sources
PLEKHM1(2)
0.005 1.000 1.32e-2 1.47e-2 ✓ sig. —
autosomal recessive spinocerebellar ataxia 10 Post-traumatic stress disorder
1 gene
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1 of 1 corroborated by 2+ sources
ANO10(2)
0.005 1.000 1.32e-2 1.47e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.