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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Developmental disability neurodevelopmental disorder with microcephaly, impaired language, and gait abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
NARS1(2)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Developmental disability neurodevelopmental disorder with microcephaly, impaired language, epilepsy, and gait abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
NARS1(2)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Developmental disability neurodevelopmental disorder with or without variable brain abnormalities; NEDBA
1 gene
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1 of 1 corroborated by 2+ sources
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. Cluster 6 →
floating-harbor syndrome Multiple myeloma
1 gene
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1 of 1 corroborated by 2+ sources
SRCAP(2)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
fraser syndrome 3 Multiple myeloma
1 gene
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1 of 1 corroborated by 2+ sources
GRIP1(2)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Desanto-shinawi syndrome Multiple myeloma
1 gene
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1 of 1 corroborated by 2+ sources
WAC(6)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Developmental disability Proximal renal tubular acidosis
1 gene
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1 of 1 corroborated by 2+ sources
SLC4A4(5)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Developmental disability PRPF8-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
PRPF8(2)
0.007 1.000 9.29e-3 1.06e-2 ✓ sig. —
Periprosthetic osteolysis Specific learning disability
1 gene
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1 of 1 corroborated by 2+ sources
OTUD7A(2)
0.042 0.083 9.32e-3 1.06e-2 ✓ sig. —
Developmental delay with impaired growth and dysmorphic facies Distal hereditary motor neuropathy
1 gene
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1 of 1 corroborated by 2+ sources
MORC2(4)
0.025 0.250 9.32e-3 1.06e-2 ✓ sig. —
Cystine urolithiasis Polycystic kidney disease
1 gene
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SLC7A9(1)
0.020 0.333 9.32e-3 1.06e-2 ✓ sig. —
Cerebellar ataxia, intellectual disability, oculomotor apraxia, cerebellar cysts Eating disorder
1 gene
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1 of 1 corroborated by 2+ sources
ATP8A2(3)
0.014 0.500 9.33e-3 1.06e-2 ✓ sig. —
Bradyopsia Leber congenital amaurosis
1 gene
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1 of 1 corroborated by 2+ sources
RGS9(3)
0.014 0.500 9.33e-3 1.06e-2 ✓ sig. —
Eating disorder Hyperprolinemia
1 gene
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1 of 1 corroborated by 2+ sources
ALDH4A1(7)
0.014 0.500 9.33e-3 1.06e-2 ✓ sig. —
Autoimmune thyroid disease immunodeficiency 64
1 gene
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1 of 1 corroborated by 2+ sources
RASGRP1(2)
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. —
Autoimmune thyroid disease isolated sulfite oxidase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SUOX(2)
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. Cluster 39 →
Autoimmune thyroid disease Primary angle-closure glaucoma
1 gene
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1 of 1 corroborated by 2+ sources
SPATA13(4)
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. Cluster 39 →
Autoimmune thyroid disease Autoinflammation, immune dysregulation, and eosinophilia
1 gene
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1 of 1 corroborated by 2+ sources
JAK1(5)
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. —
Autoimmune thyroid disease autosomal systemic lupus erythematosus type 16
1 gene
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1 of 1 corroborated by 2+ sources
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. —
Autoimmune thyroid disease developmental and epileptic encephalopathy, 41
1 gene
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1 of 1 corroborated by 2+ sources
SLC1A2(2)
0.007 1.000 9.35e-3 1.07e-2 ✓ sig. —
Cardioencephalomyopathy, fatal infantile, due to cytochrome c oxidase deficiency Mitochondrial dna depletion syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SCO2(4)
0.029 0.200 9.38e-3 1.07e-2 ✓ sig. —
histidinemia Skin neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
HAL(2)
0.007 1.000 9.42e-3 1.07e-2 ✓ sig. Cluster 29 →
Skin neoplasms xeroderma pigmentosum group A
1 gene
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1 of 1 corroborated by 2+ sources
XPA(2)
0.007 1.000 9.42e-3 1.07e-2 ✓ sig. —
autoimmune lymphoproliferative syndrome type 2A Skin neoplasms
1 gene
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1 of 1 corroborated by 2+ sources
CASP10(2)
0.007 1.000 9.42e-3 1.07e-2 ✓ sig. —
lessel-kreienkamp syndrome Mesothelioma
1 gene
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1 of 1 corroborated by 2+ sources
AGO2(2)
0.007 1.000 9.42e-3 1.07e-2 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.