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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Obstructive airway disease susceptibility to respiratory infections associated with CD8alpha chain mutation
1 gene
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1 of 1 corroborated by 2+ sources
CD8A(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. Cluster 119 →
Adenoid cystic carcinoma autosomal dominant combined immunodeficiency due to ERBIN deficiency
1 gene
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1 of 1 corroborated by 2+ sources
ERBIN(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma Developmental delay with hypotonia and behavioral abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
SRCAP(5)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma Developmental delay with hypotonia and impaired language
1 gene
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1 of 1 corroborated by 2+ sources
FBXW7(5)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
IL21-related infantile inflammatory bowel disease Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
IL21(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
immunodeficiency 25 Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
CD247(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Intellectual developmental disorder seizures cerebellar Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
RORA(4)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma Intellectual disability with craniofacial dysmorphism and macrocephaly
1 gene
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1 of 1 corroborated by 2+ sources
H1-4(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
interstitial lung disease 1 Obstructive airway disease
1 gene
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1 of 1 corroborated by 2+ sources
SFTPA1(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Laryngo-onycho-cutaneous syndrome Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
LAMA3(6)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma Zhu-tokita-takenouchi-kim syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SON(6)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Birbeck granule deficiency Seasonal allergic rhinitis
1 gene
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1 of 1 corroborated by 2+ sources
CD207(4)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma megalencephalic leukoencephalopathy with subcortical cysts 1
1 gene
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1 of 1 corroborated by 2+ sources
MLC1(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma floating-harbor syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SRCAP(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
fanconi anemia complementation group i Hereditary spastic paraplegia
1 gene
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1 of 1 corroborated by 2+ sources
FANCI(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Cardioembolic stroke Chromosome 2p16.1-p15 deletion syndrome
1 gene
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1 of 1 corroborated by 2+ sources
USP34(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Hereditary sensory and autonomic neuropathy with spastic paraplegia Hereditary spastic paraplegia
1 gene
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1 of 1 corroborated by 2+ sources
CCT5(3)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Hereditary spastic paraplegia hereditary spastic paraplegia 11
1 gene
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1 of 1 corroborated by 2+ sources
SPG11(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. Cluster 244 →
Hereditary spastic paraplegia hereditary spastic paraplegia 18
1 gene
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1 of 1 corroborated by 2+ sources
ERLIN2(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. Cluster 244 →
Hereditary spastic paraplegia hereditary spastic paraplegia 35
1 gene
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1 of 1 corroborated by 2+ sources
FA2H(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Hereditary spastic paraplegia hereditary spastic paraplegia 62
1 gene
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1 of 1 corroborated by 2+ sources
ERLIN1(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. Cluster 244 →
Hereditary spastic paraplegia hereditary spastic paraplegia 8
1 gene
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1 of 1 corroborated by 2+ sources
WASHC5(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
hermansky-pudlak syndrome 2 Lung disease
1 gene
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1 of 1 corroborated by 2+ sources
AP3B1(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Cardioembolic stroke Neurodevelopmental disorder with dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
CAMK2D(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —
Cardioembolic stroke neurodevelopmental disorder with hypotonia and variable intellectual and behavioral abnormalities
1 gene
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1 of 1 corroborated by 2+ sources
POLR2A(2)
0.010 1.000 6.56e-3 7.82e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.