Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Congenital disorder of glycosylation Parkinsonism with spasticity, x-linked
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATP6AP2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation PGM1-congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
PGM1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Combined low ldl and fibrinogen Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
B4GALT1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation type 1E
1 gene
Show details
1 of 1 corroborated by 2+ sources
DPM1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation type II
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATP6AP1(3)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation with defective fucosylation 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
FUT8(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation with defective fucosylation 2
1 gene
Show details
1 of 1 corroborated by 2+ sources
FCSK(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type 2v
1 gene
Show details
1 of 1 corroborated by 2+ sources
EDEM3(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation, type IIq
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG2(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type iit
1 gene
Show details
1 of 1 corroborated by 2+ sources
GALNT2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation congenital disorder of glycosylation, type IIz
1 gene
Show details
1 of 1 corroborated by 2+ sources
CAMLG(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation congenital disorder of glycosylation, type Iw, autosomal dominant
1 gene
Show details
1 of 1 corroborated by 2+ sources
STT3A(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Charcot-Marie-Tooth disease, demyelinating, type 1J Graves disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITPR3(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 39 →
COG1-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG1(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG4-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG4(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
COG5-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG5(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG6-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG6(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
COG7-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG7(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
COG8-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
Show details
1 of 1 corroborated by 2+ sources
COG8(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Deafness-infertility syndrome Hereditary hearing loss
1 gene
Show details
1 of 1 corroborated by 2+ sources
STRC(5)
0.019 0.500 6.48e-3 7.75e-3 ✓ sig. Cluster 26 →
Dementia in huntington’s disease Small vessel stroke
1 gene
Show details
1 of 1 corroborated by 2+ sources
JPH3(2)
0.019 0.500 6.48e-3 7.75e-3 ✓ sig. —
Promyelocytic leukemia Specific granule deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CEBPE(5)
0.019 0.500 6.48e-3 7.75e-3 ✓ sig. —
Seasonal allergic rhinitis Sensorineural deafness with renal dysfunction
1 gene
Show details
1 of 1 corroborated by 2+ sources
BSND(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma severe combined immunodeficiency due to DNA-PKcs deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKDC(2)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —
Adenoid cystic carcinoma Shukla-vernon syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
BCORL1(5)
0.010 1.000 6.49e-3 7.75e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.