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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Congenital disorder of glycosylation DHDDS-CDG
1 gene
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1 of 1 corroborated by 2+ sources
DHDDS(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DK1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DOLK(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation DPAGT1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DPAGT1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation DPM3-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
DPM3(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MAN1B1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MAN1B1(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation MAN2B2 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
MAN2B2(4)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MGAT2-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MGAT2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation microcephalic osteodysplastic dysplasia, Saul-Wilson type
1 gene
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1 of 1 corroborated by 2+ sources
COG4(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation MOGS-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MOGS(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MPDU1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPDU1(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation MPI-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
MPI(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
A4GALT-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
A4GALT(2)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG1-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG11-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG11(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG12-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG12(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG2-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG2(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG3-congenital disorder of glycosylation Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG3(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
ALG6-congenital disorder of glycosylation 1C Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG6(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
ALG9-associated autosomal dominant polycystic kidney disease Congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
ALG9(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation RFT1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
RFT1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation Sandestig-stefanova syndrome
1 gene
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1 of 1 corroborated by 2+ sources
NUP188(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation Saul-wilson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
COG4(7)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation SLC35A1-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
SLC35A1(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. Cluster 17 →
Congenital disorder of glycosylation SRD5A3-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
SRD5A3(6)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —
Congenital disorder of glycosylation STT3A-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
STT3A(5)
0.010 1.000 6.43e-3 7.68e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.