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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Cousin syndrome Obstructive sleep apnea syndrome
1 gene
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1 of 1 corroborated by 2+ sources
TBX15(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
5-oxoprolinase deficiency Atrial flutter
1 gene
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OPLAH(1)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. Cluster 4 →
Aortic valve disease aortic valve disease 3
1 gene
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1 of 1 corroborated by 2+ sources
ROBO4(5)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
hartnup disease Kidney cancer
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A19(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
hypomagnesemia, seizures, and intellectual disability 1 Obstructive sleep apnea syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CNNM2(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Aortic valve disease Short stature spectrum
1 gene
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1 of 1 corroborated by 2+ sources
ACAN(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Masp2 deficiency Neurodegenerative disorder
1 gene
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1 of 1 corroborated by 2+ sources
TARDBP(2)
0.023 0.500 5.32e-3 6.49e-3 ✓ sig. —
Tooth agenesis X-linked hypohidrotic ectodermal dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
EDA(7)
0.023 0.500 5.32e-3 6.49e-3 ✓ sig. —
Catel-manzke syndrome Neurodegenerative disorder
1 gene
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1 of 1 corroborated by 2+ sources
KYNU(2)
0.023 0.500 5.32e-3 6.49e-3 ✓ sig. —
Bone disease Caudal duplication anomaly
1 gene
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1 of 1 corroborated by 2+ sources
AXIN1(6)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Bone disease Cerebrofaciothoracic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
TMCO1(3)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Bone disease Cerebrotendinous xanthomatosis
1 gene
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1 of 1 corroborated by 2+ sources
CYP27A1(5)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Bone disease Cholestanol storage disease
1 gene
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1 of 1 corroborated by 2+ sources
CYP27A1(2)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
nonsyndromic genetic hearing loss Sensorineural deafness with dilated cardiomyopathy
1 gene
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1 of 1 corroborated by 2+ sources
EYA4(3)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Bone disease spondyloepimetaphyseal dysplasia, genevieve type
1 gene
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1 of 1 corroborated by 2+ sources
NANS(2)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Bone disease frank-ter haar syndrome
1 gene
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1 of 1 corroborated by 2+ sources
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Congenital ichthyosis with hypotrichosis syndrome Idiopathic pulmonary fibrosis
1 gene
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1 of 1 corroborated by 2+ sources
ST14(2)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Arthrogryposis with ectodermal dysplasia nonsyndromic genetic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
OTOF(2)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
dilated cardiomyopathy 1J nonsyndromic genetic hearing loss
1 gene
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EYA4(1)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
hearing impairment and infertile male syndrome nonsyndromic genetic hearing loss
1 gene
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CDC14A(1)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
nonsyndromic genetic hearing loss Peripheral neuropathy myopathy hoarseness hearing loss syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH14(2)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
nonsyndromic genetic hearing loss Peripheral neuropathy, myopathy, hoarseness, and hearing
1 gene
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1 of 1 corroborated by 2+ sources
MYH14(5)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Braddock-carey syndrome Idiopathic pulmonary fibrosis
1 gene
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1 of 1 corroborated by 2+ sources
KIF15(4)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
21q22.11q22.12 microdeletion syndrome Idiopathic pulmonary fibrosis
1 gene
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1 of 1 corroborated by 2+ sources
KIF15(3)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —
Idiopathic pulmonary fibrosis interstitial lung disease 1
1 gene
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1 of 1 corroborated by 2+ sources
SFTPA1(3)
0.012 1.000 5.33e-3 6.49e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.