Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Brain injuries Neurogenic bladder
1 gene
Show details
CHRM2(1)
0.012 1.000 5.20e-3 6.35e-3 ✓ sig. —
Brain injuries immunodeficiency, common variable, 4
1 gene
Show details
1 of 1 corroborated by 2+ sources
0.012 1.000 5.20e-3 6.35e-3 ✓ sig. —
autosomal dominant nonsyndromic hearing loss Peritoneal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL11A1(2)
0.056 0.111 5.25e-3 6.42e-3 ✓ sig. —
Asperger syndrome Peritoneal disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
DISC1(3)
0.056 0.111 5.25e-3 6.42e-3 ✓ sig. —
Sezary syndrome X-linked combined immunodeficiency diseases
1 gene
Show details
1 of 1 corroborated by 2+ sources
IL2RG(2)
0.033 0.333 5.25e-3 6.42e-3 ✓ sig. —
15q11.2 microdeletion syndrome Cortical development malformation
1 gene
Show details
1 of 1 corroborated by 2+ sources
TUBG1(3)
0.033 0.333 5.25e-3 6.42e-3 ✓ sig. Cluster 176 →
Bladder exstrophy and epispadias complex Carpenter syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
RAB23(4)
0.033 0.333 5.25e-3 6.42e-3 ✓ sig. —
Malignant glioma Rhabdomyosarcoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
PAX7(3)
0.033 0.333 5.25e-3 6.42e-3 ✓ sig. —
Kidney cancer leukodystrophy, hypomyelinating, 25
1 gene
Show details
1 of 1 corroborated by 2+ sources
TMEM163(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Aortic valve disease lissencephaly 10
1 gene
Show details
1 of 1 corroborated by 2+ sources
CEP85L(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Obstructive sleep apnea syndrome Tetany
1 gene
Show details
1 of 1 corroborated by 2+ sources
CNNM2(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Atrial flutter Trichomegaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
FGF5(5)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Neutropenia, nonimmune chronic idiopathic, adult Obstructive sleep apnea syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GFI1(4)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Combined oxidative phosphorylation defect Obstructive sleep apnea syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
WARS2(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Aortic valve disease Congenital hypogonadotropic hypogonadism
1 gene
Show details
1 of 1 corroborated by 2+ sources
EMX2(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
fanconi anemia complementation group d2 Kidney cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCD2(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Obstructive sleep apnea syndrome Pelviscapular dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX15(5)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Obstructive sleep apnea syndrome primordial dwarfism-immunodeficiency-lipodystrophy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRIM1(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Atrial flutter Progressive myoclonic epilepsy with intracellular inclusions
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRDM8(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Camptodactyly Kidney cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
TLN2(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Intellectual developmental disorder seizures cerebellar Kidney cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
RORA(4)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Aortic valve disease intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIDD1(2)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Isolated anhidrosis Kidney cancer
1 gene
Show details
1 of 1 corroborated by 2+ sources
ITPR2(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Atrial flutter Lafora body disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRDM8(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —
Aortic valve disease Congenital progressive bone marrow failure-b-cell immunodeficiency-skeletal dysplasia syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYSM1(3)
0.012 1.000 5.26e-3 6.42e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.