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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Bothnia retinal dystrophy Macular degeneration
1 gene
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1 of 1 corroborated by 2+ sources
RLBP1(6)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Macular degeneration RLBP1-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RLBP1(3)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Macular degeneration Schmid metaphyseal chondrodysplasia
1 gene
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1 of 1 corroborated by 2+ sources
COL10A1(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Hirschsprung disease schuurs-hoeijmakers syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PACS1(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Meniere disease Short stature spectrum
1 gene
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1 of 1 corroborated by 2+ sources
ACAN(3)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Macular degeneration sorsby fundus dystrophy
1 gene
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1 of 1 corroborated by 2+ sources
TIMP3(3)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Chromosome 17p13.3 microdeletion syndrome Hirschsprung disease
1 gene
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1 of 1 corroborated by 2+ sources
YWHAE(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
CNGA3-related retinopathy Macular degeneration
1 gene
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1 of 1 corroborated by 2+ sources
CNGA3(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Corneal intraepithelial dyskeratosis-palmoplantar hyperkeratosis-laryngeal dyskeratosis syndrome Hypotension
1 gene
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1 of 1 corroborated by 2+ sources
NLRP1(4)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Atrial tachyarrhythmia, infra-hisian cardiac conduction disease Meniere disease
1 gene
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TNNI3K(1)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Autoinflammation with arthritis and dyskeratosis Hypotension
1 gene
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1 of 1 corroborated by 2+ sources
NLRP1(5)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
BBS10-related ciliopathy Macular degeneration
1 gene
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1 of 1 corroborated by 2+ sources
BBS10(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Hirschsprung disease TMEM165-congenital disorder of glycosylation
1 gene
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1 of 1 corroborated by 2+ sources
TMEM165(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Macular degeneration TOPORS-related retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
TOPORS(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Hirschsprung disease Urban-schosser-spohr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SREBF1(3)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Cohen syndrome Meniere disease
1 gene
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1 of 1 corroborated by 2+ sources
VPS13B(8)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
combined immunodeficiency due to LRBA deficiency Meniere disease
1 gene
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1 of 1 corroborated by 2+ sources
LRBA(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
macrothrombocytopenia, isolated, 1, autosomal dominant Meniere disease
1 gene
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1 of 1 corroborated by 2+ sources
TUBB1(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Hirschsprung disease Mowat-wilson syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ZEB2(7)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Hirschsprung disease Mucoepithelial dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
SREBF1(4)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Meniere disease Peripheral neuropathy myopathy hoarseness hearing loss syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MYH14(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Meniere disease Peripheral neuropathy, myopathy, hoarseness, and hearing
1 gene
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1 of 1 corroborated by 2+ sources
MYH14(4)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
glycogen storage disease III Meniere disease
1 gene
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1 of 1 corroborated by 2+ sources
AGL(2)
0.015 1.000 4.35e-3 5.46e-3 ✓ sig. —
Bronchiectasis Obstructive azoospermia
1 gene
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1 of 1 corroborated by 2+ sources
CFTR(4)
0.048 0.250 4.41e-3 5.53e-3 ✓ sig. —
Anauxetic dysplasia Prion disease
1 gene
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1 of 1 corroborated by 2+ sources
POP1(6)
0.048 0.250 4.41e-3 5.53e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.