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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
immunodeficiency-centromeric instability-facial anomalies syndrome 3 Triple negative breast cancer
1 gene
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1 of 1 corroborated by 2+ sources
CDCA7(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Genetic steroid-resistant nephrotic syndrome inherited focal segmental glomerulosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CD2AP(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Hereditary steroid-resistant nephrotic syndrome inherited focal segmental glomerulosclerosis
1 gene
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1 of 1 corroborated by 2+ sources
CD2AP(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Intellectual developmental disorder microcephaly strabismus behaviora Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
POGZ(3)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
intellectual disability, autosomal dominant 42 Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
GNB1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
krabbe disease Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
GALC(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Female restricted epilepsy with intellectual disability Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
PCDH19(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
focal segmental glomerulosclerosis 3, susceptibility to Genetic steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CD2AP(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
focal segmental glomerulosclerosis 3, susceptibility to Hereditary steroid-resistant nephrotic syndrome
1 gene
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1 of 1 corroborated by 2+ sources
CD2AP(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
FOXG1 disorder Strabismus
1 gene
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1 of 1 corroborated by 2+ sources
FOXG1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
frontotemporal dementia and/or amyotrophic lateral sclerosis 1 Schizoaffective disorder
1 gene
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1 of 1 corroborated by 2+ sources
C9orf72(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Groenouw corneal dystrophy Sepsis
1 gene
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1 of 1 corroborated by 2+ sources
TGFBI(3)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
HMGB1-related brachyphalangy, polydactyly and tibial aplasia syndrome Sepsis
1 gene
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1 of 1 corroborated by 2+ sources
HMGB1(3)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Growth hormone deficiency hypogonadotropic hypogonadism 1 with or without anosmia
1 gene
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1 of 1 corroborated by 2+ sources
ANOS1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
hypogonadotropic hypogonadism 1 with or without anosmia Pituitary short stature
1 gene
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1 of 1 corroborated by 2+ sources
ANOS1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
hypogonadotropic hypogonadism 1 with or without anosmia Sheehan syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ANOS1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Growth hormone deficiency hypogonadotropic hypogonadism 3 with or without anosmia
1 gene
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1 of 1 corroborated by 2+ sources
PROKR2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
hypogonadotropic hypogonadism 3 with or without anosmia Pituitary short stature
1 gene
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1 of 1 corroborated by 2+ sources
PROKR2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Growth hormone deficiency hypogonadotropic hypogonadism 4 with or without anosmia
1 gene
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1 of 1 corroborated by 2+ sources
PROK2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 54 →
hypogonadotropic hypogonadism 4 with or without anosmia Pituitary short stature
1 gene
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1 of 1 corroborated by 2+ sources
PROK2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 54 →
hypogonadotropic hypogonadism 4 with or without anosmia Sheehan syndrome
1 gene
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1 of 1 corroborated by 2+ sources
PROK2(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 54 →
pediatric systemic lupus erythematosus Schizoaffective disorder
1 gene
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1 of 1 corroborated by 2+ sources
SAT1(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Panic disorder Pemphigus foliaceus
1 gene
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RAN(1)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. Cluster 156 →
Genetic steroid-resistant nephrotic syndrome nephrotic syndrome, type 12
1 gene
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1 of 1 corroborated by 2+ sources
NUP93(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —
Hereditary steroid-resistant nephrotic syndrome nephrotic syndrome, type 12
1 gene
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1 of 1 corroborated by 2+ sources
NUP93(2)
0.029 1.000 2.21e-3 3.11e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.