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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
congenital heart defects, multiple types, 2 Diverticulitis
1 gene
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1 of 1 corroborated by 2+ sources
TAB2(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Congenital ichthyosis-intellectual disability-spastic quadriplegia syndrome Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
ELOVL4(6)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Dominant hereditary optic atrophy Stargardt disease
1 gene
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OPA1(1)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Early-onset obesity-hyperphagia-severe developmental delay syndrome Internet addiction disorder
1 gene
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1 of 1 corroborated by 2+ sources
NTRK2(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Ehlers-Danlos syndrome, spondylocheirodysplastic type Scleroderma
1 gene
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1 of 1 corroborated by 2+ sources
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 12
1 gene
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1 of 1 corroborated by 2+ sources
NUP93(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 13
1 gene
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1 of 1 corroborated by 2+ sources
NUP205(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 18
1 gene
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1 of 1 corroborated by 2+ sources
NUP133(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 19
1 gene
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NUP160(1)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 20
1 gene
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1 of 1 corroborated by 2+ sources
TBC1D8B(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 3
1 gene
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1 of 1 corroborated by 2+ sources
PLCE1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
Idiopathic steroid-resistant nephrotic syndrome nephrotic syndrome, type 8
1 gene
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1 of 1 corroborated by 2+ sources
ARHGDIA(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 30 →
OPA1-related optic atrophy with or without extraocular features Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
OPA1(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Gonadal dysgenesis Ovarian teratoma
1 gene
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1 of 1 corroborated by 2+ sources
BMP15(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 38 →
Hereditary parkinson disease Parkinson-dementia syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MAPT(5)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
PCARE-related retinopathy Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
PCARE(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. Cluster 7 →
Gonadal dysgenesis perrault syndrome 2
1 gene
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1 of 1 corroborated by 2+ sources
HARS2(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Gonadal dysgenesis perrault syndrome 3
1 gene
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1 of 1 corroborated by 2+ sources
CLPP(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Postaxial acrofacial dysostosis Sickle cell anemia
1 gene
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1 of 1 corroborated by 2+ sources
DHODH(5)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Multinodular goiter progressive encephalopathy with leukodystrophy due to DECR deficiency
1 gene
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1 of 1 corroborated by 2+ sources
NADK2(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
PROM1-related dominant retinopathy Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
PROM1(6)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
PROM1-related recessive retinopathy Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
PROM1(6)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Leber hereditary optic neuropathy RDH12-related dominant retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RDH12(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
RDH12-related dominant retinopathy Stargardt disease
1 gene
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1 of 1 corroborated by 2+ sources
RDH12(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —
Leber hereditary optic neuropathy RDH12-related recessive retinopathy
1 gene
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1 of 1 corroborated by 2+ sources
RDH12(2)
0.034 1.000 1.82e-3 2.68e-3 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.