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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Waardenburg syndrome type 4A Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EDNRB(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Waardenburg syndrome type 4B Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
EDN3(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 229 →
Waardenburg syndrome type 4C Waardenburg-shah syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOX10(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
11p partial monosomy syndrome Wagr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Denys drash syndrome Wagr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Drash syndrome Wagr syndrome
1 gene
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1 of 1 corroborated by 2+ sources
WT1(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 35 →
Congenital pectus carinatum Weill-marchesani syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FBN1(7)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 52 →
Coronary artery dissection Weill-marchesani syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FBN1(7)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 52 →
Severe lipodystrophic laminopathy Werner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 65 →
Dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome Werner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 65 →
Lipoatrophic diabetes mellitus Werner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 65 →
Malouf syndrome Werner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 65 →
dilated cardiomyopathy 1A Werner syndrome
1 gene
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1 of 1 corroborated by 2+ sources
LMNA(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 65 →
Cleft lip and cleft of alveolar process of maxilla Witkop syndrome
1 gene
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1 of 1 corroborated by 2+ sources
MSX1(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Bladder cancer Woolly hair nevus
1 gene
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1 of 1 corroborated by 2+ sources
HRAS(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 18 →
Penile neoplasms Woolly hair nevus
1 gene
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1 of 1 corroborated by 2+ sources
HRAS(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 18 →
X-linked erythropoietic protoporphyria X-linked sideroblastic anemia
1 gene
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1 of 1 corroborated by 2+ sources
ALAS2(7)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 158 →
Arts syndrome X-linked nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
PRPS1(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 257 →
Prpp synthetase superactivity X-linked nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
PRPS1(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 257 →
X-linked intellectual disability-limb spasticity-retinal dystrophy-diabetes insipidus syndrome X-linked nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
PRPS1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 257 →
phosphoribosylpyrophosphate synthetase superactivity X-linked nonsyndromic hearing loss
1 gene
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1 of 1 corroborated by 2+ sources
PRPS1(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 257 →
Keratitis ichthyosis hearing loss syndrome Xeroderma
1 gene
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1 of 1 corroborated by 2+ sources
GJB2(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 322 →
Bart-pumphrey syndrome Xeroderma
1 gene
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1 of 1 corroborated by 2+ sources
GJB2(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 322 →
Waardenburg-shah syndrome Yemenite deaf-blind hypopigmentation syndrome
1 gene
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1 of 1 corroborated by 2+ sources
SOX10(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Chromosome 8p23.1 monosomy Yorifuji okuno syndrome
1 gene
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GATA4(1)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 60 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.