Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Digenic hemochromatosis hemochromatosis type 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
TFR2(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 135 →
Digenic hemochromatosis hemochromatosis type 1
1 gene
Show details
1 of 1 corroborated by 2+ sources
HFE(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Digenic hemochromatosis hemochromatosis type 2B
1 gene
Show details
1 of 1 corroborated by 2+ sources
HAMP(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 135 →
dilated cardiomyopathy 1L Salivary gland disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SGCD(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
dilated cardiomyopathy 2B Heimler syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
GATAD1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 219 →
Discordant ventriculoarterial connection Microvascular angina
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTHFR(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Discordant ventriculoarterial connection homocystinuria due to methylene tetrahydrofolate reductase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
MTHFR(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Discordant ventriculoarterial connection immunodeficiency 114, folate-responsive
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC19A1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 113 →
Anonychia Dominant dystrophic epidermolysis bullosa, albopapular type
1 gene
Show details
COL7A1(1)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 160 →
Dopa-responsive dystonia GTP cyclohydrolase I deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
GCH1(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 112 →
Dopa-responsive dystonia Intellectual developmental disorder language neurodegenerative
1 gene
Show details
1 of 1 corroborated by 2+ sources
NR4A2(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Dopamine transporter deficiency syndrome Mild cognitive impairment
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC6A3(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 392 →
Doyne honeycomb retinal dystrophy PRPH2-related retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRPH2(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Doyne honeycomb retinal dystrophy Factor i deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
CFI(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 107 →
Duplication of pituitary gland Gorlin syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PTCH2(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 203 →
Dysgenesis of corpus callosum koolen-de vries syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
KANSL1(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Congenital idiopathic intestinal pseudoobstruction Dysgenesis of corpus callosum
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 62 →
Dysgenesis of corpus callosum Otopalatodigital spectrum disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 62 →
Dysgenesis of corpus callosum Terminal osseous dysplasia with pigmentary defects
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLNA(6)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 62 →
dyskeratosis congenita, autosomal dominant 2 Macrocytic anemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
TERT(2)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. —
Becker nevus syndrome Dysphoric mood
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 186 →
Congenital smooth muscle hamartoma Dysphoric mood
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(4)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 186 →
Developmental malformations-deafness-dystonia syndrome Dysphoric mood
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(5)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 186 →
Dysphoric mood Dystonia-deafness syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 186 →
ACTB-associated syndromic thrombocytopenia Dysphoric mood
1 gene
Show details
1 of 1 corroborated by 2+ sources
ACTB(3)
0.200 1.000 2.60e-4 6.51e-4 ✓ sig. Cluster 186 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.