Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Arachnoid cysts Corpus callosum agenesis with abnormal genitalia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 259 →
Arachnoid cysts X-linked lissencephaly
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 259 →
Arachnoid cysts X-linked spasticity-intellectual disability-epilepsy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ARX(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 259 →
Arginine vasopressin deficiency Shy-drager syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
AVP(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Episodic kinesigenic dyskinesia Familial infantile convulsions with paroxysmal choreoathetosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRRT2(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 58 →
Episodic kinesigenic dyskinesia Paroxysmal dystonia
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRRT2(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 58 →
Erythrokeratodermia-cardiomyopathy syndrome Right ventricular cardiomyopathy
1 gene
Show details
DSP(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 201 →
Erythromelalgia hereditary sensory and autonomic neuropathy type 7
1 gene
Show details
1 of 1 corroborated by 2+ sources
SCN11A(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 164 →
Esophageal and gastric varices Vipoma
1 gene
Show details
SST(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 270 →
exostoses, multiple, type 1 Trichorhinophalangeal syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EXT1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
exostoses, multiple, type 2 Potocki-shaffer syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EXT2(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 93 →
Factor h deficiency Thrombotic microangiopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CFH(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 107 →
Factor i deficiency Thrombotic microangiopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
CFI(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 107 →
Factor vii deficiency Hematoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
F7(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
FAM111A-related skeletal dysplasia Kenny-caffey syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAM111A(7)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
familial acute necrotizing encephalopathy Hyperkalemic periodic paralysis
1 gene
Show details
1 of 1 corroborated by 2+ sources
RANBP2(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 163 →
Familial adenomatous polyposis Turcot syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
APC(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Familial polycythemia Growth retardation, mild developmental delay, chronic hepatitis syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
SH2B3(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Familial polycythemia SH2B3-related immune system disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SH2B3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
FANCM Fanconi-like genomic instability disorder hereditary breast carcinoma
1 gene
Show details
FANCM(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
FAS-related autoimmune lymphoproliferative immune disorder Leukocyte disorders
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAS(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 155 →
FAT4-related neurodevelopmental disorder Hennekam syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAT4(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Ferroxidase deficiency Hemosiderosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
CP(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 231 →
Ferroxidase deficiency hemochromatosis type 4
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC40A1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 231 →
Ferroxidase deficiency hermansky-pudlak syndrome 3
1 gene
Show details
1 of 1 corroborated by 2+ sources
HPS3(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 231 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.