Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Concentric hypertrophic cardiomyopathy Timothy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CACNA1C(6)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital analbuminemia Hyperthyroxinemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
ALB(8)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital blindness GUCY2D-related dominant retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GUCY2D(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital blindness GUCY2D-related recessive retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
GUCY2D(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital blindness Retinitis pigmentosa with choroidal involvement
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 241 →
Congenital blindness RPE65-related recessive retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 241 →
Congenital blindness RPE65-related dominant retinopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPE65(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 241 →
Congenital cataract hypertrophic cardiomyopathy mitochondrial myopathy syndrome mitochondrial DNA depletion syndrome 12B (cardiomyopathic type), autosomal recessive
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC25A4(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 412 →
Congenital cataract hypertrophic cardiomyopathy mitochondrial myopathy syndrome Triokinase and fmn cyclase deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
TKFC(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 412 →
Congenital facial anomaly Thauvin-robinet-faivre syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FIBP(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 168 →
Congenital facial anomaly developmental and epileptic encephalopathy, 50
1 gene
Show details
1 of 1 corroborated by 2+ sources
CAD(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 168 →
Congenital factor v deficiency Venous hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
F5(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 37 →
Congenital factor vii deficiency Hematoma
1 gene
Show details
1 of 1 corroborated by 2+ sources
F7(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital hypoplasia of aortic arch Ventricular hypertrophy
1 gene
Show details
PKHD1(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 157 →
17q23.1q23.2 microdeletion syndrome Congenital hypoplasia of lung
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX4(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
Amelia Congenital hypoplasia of lung
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX4(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
Chromosome 17q23.1-q23.2 duplication syndrome Congenital hypoplasia of lung
1 gene
Show details
TBX4(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
Congenital hypoplasia of lung Coxopodopatellar syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX4(3)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
Congenital hypoplasia of lung Ischiocoxopodopatellar syndrome with pulmonary arterial hypertension
1 gene
Show details
1 of 1 corroborated by 2+ sources
TBX4(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 24 →
Congenital hypoplasia of pancreas Partial pancreatic agenesis
1 gene
Show details
PDX1(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital hypotonia, epilepsy, developmental delay, and digital anomalies X-linked hydrocephalus syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATN1(4)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital kidney anomaly Liver cyst
1 gene
Show details
PKD1(1)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. Cluster 70 →
Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi Short syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3R1(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi PIK3R1-related immunodeficiency and SHORT syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3R1(2)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —
Clapo syndrome Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi
1 gene
Show details
1 of 1 corroborated by 2+ sources
PIK3CA(5)
0.250 1.000 1.95e-4 5.35e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.