Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Arts syndrome Ataxia with deafness and vision loss
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRPS1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 257 →
asphyxiating thoracic dystrophy 3 Bowed long bones
1 gene
Show details
1 of 1 corroborated by 2+ sources
DYNC2H1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 263 →
Asplenia Congenital asplenia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPSA(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 161 →
Asplenia Splenic hypoplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
RPSA(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 161 →
Asymmetric crying face association Branchiooculofacial syndrome
1 gene
Show details
EYA1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 145 →
Asymmetric crying face association Branchiootic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EYA1(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 145 →
Asymmetric crying face association Otofaciocervical syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EYA1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 145 →
Ataxia with deafness and vision loss Ring dermoid of cornea
1 gene
Show details
1 of 1 corroborated by 2+ sources
PITX2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Ataxia with deafness and vision loss Prpp synthetase superactivity
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRPS1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 257 →
Ataxia with deafness and vision loss X-linked intellectual disability-limb spasticity-retinal dystrophy-diabetes insipidus syndrome
1 gene
Show details
PRPS1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 257 →
Ataxia with intention tremor and hypotonia Cervical dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
POU4F1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 204 →
Ataxia with intention tremor and hypotonia Uterine disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
POU4F1(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 204 →
Ataxia with polyneuropathy Periodic paralysis
1 gene
Show details
ATP6(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 90 →
Ataxia-pancytopenia syndrome Spectrum and myeloid neoplasm risk
1 gene
Show details
1 of 1 corroborated by 2+ sources
SAMD9L(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Ataxia, spastic, autosomal recessive Spastic ataxia with leukoencephalopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
MARS2(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Ateleiotic dwarfism Congenital isolated growth hormone deficiency
1 gene
Show details
1 of 1 corroborated by 2+ sources
GH1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 82 →
Atelosteogenesis De la chapelle dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC26A2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 183 →
Atelosteogenesis Diastrophic dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC26A2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 183 →
Atelosteogenesis Diastrophic dysplasia, broad bone-platyspondylic variant
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC26A2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 183 →
Atelosteogenesis Ear disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC26A2(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 183 →
Atelosteogenesis SLC26A2-related skeletal dysplasia
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC26A2(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 183 →
Atr-x syndrome Intellectual developmental disorder hypotonic x-linked
1 gene
Show details
1 of 1 corroborated by 2+ sources
ATRX(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 122 →
Atrioventricular excitation abnormality PRKAG2-related cardiomyopathy
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRKAG2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 318 →
Atrioventricular excitation abnormality MYH-6 related congenital heart defects
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH6(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 318 →
Atrioventricular excitation abnormality dilated cardiomyopathy 1EE
1 gene
Show details
1 of 1 corroborated by 2+ sources
MYH6(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 318 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.