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What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
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Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
Coq7-related distal hereditary motor neuropathy Primary coenzyme q10 deficiency
1 gene
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1 of 1 corroborated by 2+ sources
COQ7(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Coronary artery dissection Crst syndrome
1 gene
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FBN1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 52 →
Coronary artery dissection Dilatation of pulmonary artery
1 gene
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FBN1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 52 →
Corpus callosum agenesis with abnormal genitalia Lissencephaly, x-linked
1 gene
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1 of 1 corroborated by 2+ sources
ARX(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 259 →
Corpus callosum agenesis with facial anomalies and robin sequence Toriello-carey syndrome
1 gene
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1 of 1 corroborated by 2+ sources
DDX3X(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 40 →
Cortical congenital hyperostosis Maternal hypertension
1 gene
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COL1A1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 138 →
Cortical congenital hyperostosis Rhizomelia
1 gene
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COL1A1(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 138 →
Corticosterone methyl oxidase type i Glucocorticoid-remediable aldosteronism
1 gene
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CYP11B2(1)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 276 →
Corticosterone methyloxidase deficiency Glucocorticoid-remediable aldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
CYP11B2(6)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 276 →
Corticosterone monooxygenase deficiency Glucocorticoid-remediable aldosteronism
1 gene
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1 of 1 corroborated by 2+ sources
CYP11B2(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 276 →
Cowchock syndrome X-linked hereditary sensory and autonomic neuropathy with deafness
1 gene
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1 of 1 corroborated by 2+ sources
AIFM1(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Coxopodopatellar syndrome Patellar aplasia
1 gene
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1 of 1 corroborated by 2+ sources
TBX4(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 24 →
Craniofaciocardiohepatic syndrome Tethered cord syndrome
1 gene
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1 of 1 corroborated by 2+ sources
AMOTL1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Craniofaciosynostosis Osteoglophonic dysplasia
1 gene
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1 of 1 corroborated by 2+ sources
FGFR1(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 185 →
Craniofaciosynostosis Hartsfield-Bixler-Demyer syndrome
1 gene
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1 of 1 corroborated by 2+ sources
FGFR1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 185 →
Cranioosteoarthropathy Medullary carcinoma
1 gene
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1 of 1 corroborated by 2+ sources
HPGD(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Cranioosteoarthropathy Primary hypertrophic osteoarthropathy
1 gene
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1 of 1 corroborated by 2+ sources
HPGD(5)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Craniopharyngioma Hairy cell leukemia
1 gene
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1 of 1 corroborated by 2+ sources
BRAF(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Craniopharyngioma Intellectual developmental disorder dysmorphic ocular microcephaly peripheral
1 gene
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1 of 1 corroborated by 2+ sources
CTNNB1(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 104 →
Craniopharyngioma CTNNB1-related neurodevelopmental disorder and/or vitreoretinopathy
1 gene
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1 of 1 corroborated by 2+ sources
CTNNB1(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 104 →
craniosynostosis 2 Parietal foramina
1 gene
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1 of 1 corroborated by 2+ sources
MSX2(7)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 93 →
craniosynostosis 4 Crouzon syndrome
1 gene
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1 of 1 corroborated by 2+ sources
ERF(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 85 →
craniosynostosis 4 Parieto-occipital craniosynostosis
1 gene
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1 of 1 corroborated by 2+ sources
ERF(2)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. —
Creatine deficiency Guanidinoacetate methyltransferase deficiency
1 gene
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1 of 1 corroborated by 2+ sources
GAMT(3)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 358 →
Creatine deficiency Creatine transporter deficiency
1 gene
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1 of 1 corroborated by 2+ sources
SLC6A8(4)
0.333 1.000 1.30e-4 3.93e-4 ✓ sig. Cluster 358 →

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.