Log in to save this analysis

Save This Analysis

What do these columns mean?
Shared genes
Curated genes linked to both diseases (disease_gdp). The line below it shows how many of those are "corroborated" -- backed by 2+ independent database sources combined across both diseases, not resting on a single source's say-so.
Similarity score
Jaccard-based: shared genes ÷ the union of both diseases' entire gene sets, with a small boost from users who bookmarked both diseases. Treats both diseases symmetrically.
Overlap coefficient
Shared genes ÷ the smaller disease's own total gene count. Complements the similarity score above for asymmetric pairs -- e.g. a rare disease almost entirely "contained" in a common disease's much larger gene set scores low on Jaccard but high here.
P-value / FDR q-value
Is this gene overlap more than chance? An upper-tail hypergeometric test, Benjamini-Hochberg corrected across every tested pair (the q-value is the one that accounts for testing thousands of pairs at once -- prefer it over the raw p-value).
Shared cluster
Links to a multi-disease cluster (see Disease Clusters) if both diseases of this pair were independently grouped together by that separate analysis.
ⓘ Shows only pairs whose gene overlap is too large to be down to chance (FDR q-value below 0.05). These are the rows marked ✓ sig. in the table. ⓘ Shows only pairs where both diseases also belong to the same group on the Disease Clusters page. Two separate analyses agree they're related, so the link is stronger. These are the rows with a link in the Shared cluster column.
0 selected Clear
Disease A ⇵Disease B ⇵Shared genes ⇵Similarity score ⇵Overlap coefficient ⇵P-value ⇵FDR q-value ▲ Shared cluster
erythrocytosis, familial, 6 Hemoglobin c beta thalassemia
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
erythrocytosis, familial, 6 Hemoglobin d disease
1 gene
Show details
1 of 1 corroborated by 2+ sources
HBB(3)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 19 →
exostoses, multiple, type 2 Seizures, scoliosis, and macrocephaly/microcephaly syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
EXT2(6)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 93 →
Eye manifestations Partial epilepsy with variable foci
1 gene
Show details
1 of 1 corroborated by 2+ sources
APP(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 116 →
Eye pain Rhabdomyoma
1 gene
Show details
POMC(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 376 →
Eye pain Sacroiliitis
1 gene
Show details
1 of 1 corroborated by 2+ sources
POMC(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 376 →
Factor h deficiency Genetic hemolytic uremic syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
CFH(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 107 →
FAM111A-related skeletal dysplasia Osteocraniostenosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAM111A(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Familial adenomatous polyposis gastric adenocarcinoma and proximal polyposis of the stomach
1 gene
Show details
1 of 1 corroborated by 2+ sources
APC(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 41 →
Familial cylindromatosis Multiple familial trichoepithelioma
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYLD(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Familial cylindromatosis frontotemporal dementia and/or amyotrophic lateral sclerosis 8
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYLD(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Familial hematuria-retinal arteriolar tortuosity-contractures syndrome Retinal arterial tortuosity
1 gene
Show details
1 of 1 corroborated by 2+ sources
COL4A1(4)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 154 →
Familial hypoaldosteronism Hyperreninemic hypoaldosteronism
1 gene
Show details
1 of 1 corroborated by 2+ sources
CYP11B2(5)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 276 →
Familial infantile convulsions with paroxysmal choreoathetosis Paroxysmal dystonia
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRRT2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 58 →
Familial infantile convulsions with paroxysmal choreoathetosis infantile convulsions and choreoathetosis
1 gene
Show details
1 of 1 corroborated by 2+ sources
PRRT2(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. Cluster 58 →
familial ovarian cancer fanconi anemia complementation group j
1 gene
Show details
BRIP1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fanconi anemia complementation group b Vacterl-hydrocephalus syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FANCB(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fanconi anemia complementation group n PALB2-related cancer predisposition
1 gene
Show details
PALB2(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fanconi anemia complementation group o RAD51C-related cancer predisposition
1 gene
Show details
RAD51C(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
Fatty acid and ketone body metabolism disorder Fatty acid oxidation and ketone body metabolism disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
SLC16A1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fatty acyl-CoA reductase 1 deficiency Peroxisomal fatty acyl-coa reductase 1 disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAR1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fatty acyl-CoA reductase 1 deficiency fatty acyl-CoA reductase 1 upregulation
1 gene
Show details
FAR1(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fatty acyl-CoA reductase 1 upregulation Peroxisomal fatty acyl-coa reductase 1 disorder
1 gene
Show details
1 of 1 corroborated by 2+ sources
FAR1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
fetal akinesia, respiratory insufficiency, microcephaly, polymicrogyria, and dysmorphic facies hemiplegic migraine-developmental and epileptic encephalopathy spectrum
1 gene
Show details
ATP1A2(1)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —
FLVCR1-related retinopathy with or without ataxia Retinopathy-sensory neuropathy syndrome
1 gene
Show details
1 of 1 corroborated by 2+ sources
FLVCR1(2)
0.500 1.000 6.49e-5 2.33e-4 ✓ sig. —

Showing 25 of 20813 pairs, sorted by significance (ascending). Click a column header to sort.