Gene Gene information from NCBI Gene database.
Entrez ID 9877
Gene name Zinc finger CCCH-type containing 11A
Gene symbol ZC3H11A
Synonyms (NCBI Gene)
ZC3HDC11A
Chromosome 1
Chromosome location 1q32.1
miRNA miRNA information provided by mirtarbase database.
1062
miRTarBase ID miRNA Experiments Reference
MIRT017449 hsa-miR-335-5p Microarray 18185580
MIRT023668 hsa-miR-1-3p Proteomics 18668040
MIRT031561 hsa-miR-16-5p Proteomics 18668040
MIRT032296 hsa-let-7b-5p Proteomics 18668040
MIRT046201 hsa-miR-27b-3p CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
11
GO ID Ontology Definition Evidence Reference
GO:0000346 Component Transcription export complex IDA 22928037
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0005515 Function Protein binding IPI 16189514, 19060904, 22928037, 25609649, 27229929, 29892012, 31515488, 39251607
GO:0005634 Component Nucleus IEA
GO:0005654 Component Nucleoplasm TAS
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
613513 29093 ENSG00000058673
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O75152
Protein name Zinc finger CCCH domain-containing protein 11A
Protein function Through its association with TREX complex components, may participate in the export and post-transcriptional coordination of selected mRNA transcripts, including those required to maintain the metabolic processes in embryonic cells (PubMed:22928
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF15663 zf-CCCH_3 1 110 Zinc-finger containing family Family
Sequence
MPNQGEDCYFFFYSTCTKGDSCPFRHCEAAIGNETVCTLWQEGRCFRQVCRFRHMEIDKK
RSEIPCYWENQPTGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPE
EEVKASQLSV
QQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTP
TLQPTPEVHNGLRVTSVRKPAVNIKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVS
SLLLHPEPVPGPEKENVRTVVRTVTLSTKQGEEPLVRLSLTERLGKRKFSAGGDSDPPLK
RSLAQRLGKKVEAPETNIDKTPKKAQVSKSLKERLGMSADPDNEDATDKVNKVGEIHVKT
LEEILLERASQKRGELQTKLKTEGPSKTDDSTSGARSSSTIRIKTFSEVLAEKKHRQQEA
ERQKSKKDTTCIKLKIDSEIKKTVVLPPIVASRGQSEEPAGKTKSMQEVHIKTLEEIKLE
KALRVQQSSESSTSSPSQHEATPGARRLLRITKRTGMKEEKNLQEGNEVDSQSSIRTEAK
EASGETTGVDITKIQVKRCETMREKHMQKQQEREKSVLTPLRGDVASCNTQVAEKPVLTA
VPGITRHLTKRLPTKSSQKVEVETSGIGDSLLNVKCAAQTLEKRGKAKPKVNVKPSVVKV
VSSPKLAPKRKAVEMHAAVIAAVKPLSSSSVLQEPPAKKAAVAVVPLVSEDKSVTVPEAE
NPRDSLVLPPTQSSSDSSPPEVSGPSSSQMSMKTRRLSSASTGKPPLSVEDDFEKLIWEI
SGGKLEAEIDLDPGKDEDDLLLELSEMIDS
Sequence length 810
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3'-end processing
RNA Polymerase II Transcription Termination
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
4
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Colorectal cancer Uncertain significance rs148859249 RCV005929043
Lung cancer Uncertain significance rs148859249 RCV005929046
Ovarian serous cystadenocarcinoma Uncertain significance rs148859249 RCV005929045
Sarcoma Uncertain significance rs148859249 RCV005929044
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Breast Neoplasms Associate 25038754
Melanoma Associate 36052492
Neoplasm Metastasis Stimulate 36052492
Neoplasms Associate 36052492