Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
93134
Gene name Gene Name - the full gene name approved by the HGNC.
Zinc finger protein 561
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
ZNF561
Synonyms (NCBI Gene) Gene synonyms aliases
-
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19p13.2
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020566 hsa-miR-155-5p Reporter assay;Other 20584899
MIRT023525 hsa-miR-1-3p Microarray 18668037
MIRT042643 hsa-miR-423-3p CLASH 23622248
MIRT636990 hsa-miR-649 HITS-CLIP 23824327
MIRT636988 hsa-miR-6890-3p HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA 21873635
GO:0000981 Function DNA-binding transcription factor activity, RNA polymerase II-specific IBA 21873635
GO:0005634 Component Nucleus IBA 21873635
GO:0006357 Process Regulation of transcription by RNA polymerase II IBA 21873635
GO:0046872 Function Metal ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
HGNC N/A HGNC
Protein
UniProt ID Q8N587
Protein name Zinc finger protein 561
Protein function May be involved in transcriptional regulation.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01352 KRAB 40 81 KRAB box Family
PF00096 zf-C2H2 197 219 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 281 303 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 309 331 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 337 359 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 365 387 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 393 415 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 421 443 Zinc finger, C2H2 type Domain
PF00096 zf-C2H2 449 471 Zinc finger, C2H2 type Domain
Sequence
MAAIYLSRGFFSREPICPFEEKTKVERMVEDYLASGYQDSVTFDDVAVDFTPEEWALLDT
TEKYLYRDVMLENYMNLASVE
WEIQPRTKRSSLQQGFLKNQIFSGIQMTRGYSGWKLCDC
KNCGEVFREQFCLKTHMRVQNGGNTSEGNCYGKDTLSVHKEASTGQELSKFNPCGKVFTL
TPGLAVHLEVLNARQPYKCKECGKGFKYFASLDNHMGIHTDEKLCEFQEYGRAVTASSHL
KQCVAVHTGKKSKKTKKCGKSFTNFSQLYAPVKTHKGEKSFECKECGRSFRNSSCLNDHI
QIH
TGIKPHKCTYCGKAFTRSTQLTEHVRTHTGIKPYECKECGQAFAQYSGLSIHIRSHS
GKKPYQCKECGKAFTTSTSLIQHTRIHTGEKPYECVECGKTFITSSRRSKHLKTHSGEKP
FVCKICGKAFLYSSRLNVHLRTHTGEKPFVCKECGKAFAVSSRLSRHERIHTGEKPYECK
DMSVTI
Sequence length 486
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Generic Transcription Pathway
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Hypercholesterolemia Hypercholesterolemia, Familial rs28942111, rs28942112, rs137852912, rs121908025, rs28942082, rs28942083, rs121908028, rs121908030, rs28942079, rs28942084, rs121908032, rs387906302, rs387906303, rs121908033, rs121908034
View all (1161 more)
22968135
Associations from Text Mining
Disease Name Relationship Type References
Colorectal Neoplasms Associate 31724326
Laryngeal Neoplasms Stimulate 32174248
Squamous Cell Carcinoma of Head and Neck Associate 32174248