Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
928
Gene name Gene Name - the full gene name approved by the HGNC.
CD9 molecule
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
CD9
Synonyms (NCBI Gene) Gene synonyms aliases
BTCC-1, DRAP-27, MIC3, MRP-1, TSPAN-29, TSPAN29
Chromosome Chromosome number
12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
12p13.31
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Tetraspanins are cell surface glycoproteins with four transmembrane domains that form multimeric complexes with other cell surface proteins. The encoded p
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT018296 hsa-miR-335-5p Microarray 18185580
MIRT019530 hsa-miR-326 Western blot;qRT-PCR 19883630
MIRT876423 hsa-miR-1283 CLIP-seq
MIRT876424 hsa-miR-1286 CLIP-seq
MIRT876425 hsa-miR-3149 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0002576 Process Platelet degranulation TAS
GO:0005178 Function Integrin binding IDA 12796480, 27993971
GO:0005515 Function Protein binding IPI 11278880, 11504738, 12796480, 15344881, 18541721, 23091066, 23289620, 23858057, 26686862, 30833792, 32296183
GO:0005615 Component Extracellular space HDA 16502470
GO:0005886 Component Plasma membrane ISS
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
143030 1709 ENSG00000010278
Protein
UniProt ID P21926
Protein name CD9 antigen (5H9 antigen) (Cell growth-inhibiting gene 2 protein) (Leukocyte antigen MIC3) (Motility-related protein) (MRP-1) (Tetraspanin-29) (Tspan-29) (p24) (CD antigen CD9)
Protein function Integral membrane protein associated with integrins, which regulates different processes, such as sperm-egg fusion, platelet activation and aggregation, and cell adhesion (PubMed:14575715, PubMed:18541721, PubMed:8478605). Present at the cell su
PDB 6K4J , 6RLO , 6RLR , 6Z1V , 6Z20
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00335 Tetraspanin 10 220 Tetraspanin family Family
Tissue specificity TISSUE SPECIFICITY: Detected in platelets (at protein level) (PubMed:19640571). Expressed by a variety of hematopoietic and epithelial cells (PubMed:19640571). {ECO:0000269|PubMed:19640571}.
Sequence
Sequence length 228
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Virion - Hepatitis viruses
Hematopoietic cell lineage
  Platelet degranulation
Acrosome Reaction and Sperm:Oocyte Membrane Binding
Uptake and function of diphtheria toxin
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Neoplasm Neoplasms, Germ Cell and Embryonal, Neoplasms, Embryonal and Mixed rs137854562, rs137854565, rs137854568, rs137854574, rs121434220, rs121909218, rs121909222, rs587776667, rs606231169, rs587776701, rs121913388, rs137852578, rs137852216, rs121912651, rs28934575
View all (247 more)
16168501
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
24836286
Colorectal neoplasms Colorectal Neoplasms rs28929483, rs63751108, rs28929484, rs63749831, rs63750047, rs63751207, rs63749811, rs1553350126, rs63750875, rs63750955, rs587776706, rs63750871, rs587776715, rs63751466, rs63750049
View all (1682 more)
24836286
Glioblastoma Glioblastoma, Glioblastoma Multiforme rs121913500, rs886042842, rs1555138291, rs1558518449, rs1567176006, rs1558650888 26573230
Unknown
Disease term Disease name Evidence References Source
Breast Cancer Breast Cancer Importantly, breast cancer patients bearing PRC2 LOF mutations displayed significantly worse prognosis compared with PRC2 wild-type patients GWAS, CBGDA
Associations from Text Mining
Disease Name Relationship Type References
Acute On Chronic Liver Failure Associate 35330909
Adenocarcinoma Associate 20543560, 22613496
Arthritis Rheumatoid Associate 36826611
Asthenozoospermia Associate 23174138
Atherosclerosis Associate 9396739
Autoimmune Diseases Associate 39212542
Bernard Soulier Syndrome Associate 19459130
beta Thalassemia Associate 17178667, 31399060, 32278313
Blood Platelet Disorders Associate 1840589
Bone Marrow Diseases Associate 19604240