ZBED1 (zinc finger BED-type containing 1)

Gene

• Entrez ID: 9189
• Gene name: Zinc finger BED-type containing 1
• Gene symbol: ZBED1
• Synonyms (NCBI Gene): ALTE, DREF, TRAMP, hDREF
• Chromosome: X|Y
• Chromosome location: X;Y
• Summary: This gene is located in the pseudoautosomal region 1 (PAR1) of X and Y chromosomes. It was earlier identified as a gene with similarity to Ac transposable elements, however, was found not to have transposase activity. Later studies show that this gene pro

miRNA

miRTarBase ID	miRNA	Experiments	Reference
MIRT019734	hsa-miR-375	Microarray	20215506
MIRT029074	hsa-miR-26b-5p	Microarray	19088304
MIRT030435	hsa-miR-24-3p	Microarray	19748357
MIRT043249	hsa-miR-324-5p	CLASH	23622248
MIRT038468	hsa-miR-296-3p	CLASH	23622248
MIRT709560	hsa-miR-106a-5p	HITS-CLIP	19536157
MIRT709559	hsa-miR-106b-5p	HITS-CLIP	19536157
MIRT709558	hsa-miR-17-5p	HITS-CLIP	19536157
MIRT709557	hsa-miR-20a-5p	HITS-CLIP	19536157
MIRT709556	hsa-miR-20b-5p	HITS-CLIP	19536157
MIRT709555	hsa-miR-519d-3p	HITS-CLIP	19536157
MIRT709554	hsa-miR-526b-3p	HITS-CLIP	19536157
MIRT709553	hsa-miR-93-5p	HITS-CLIP	19536157
MIRT709552	hsa-miR-302a-3p	HITS-CLIP	19536157
MIRT709551	hsa-miR-302b-3p	HITS-CLIP	19536157
MIRT709550	hsa-miR-302c-3p	HITS-CLIP	19536157
MIRT709549	hsa-miR-302d-3p	HITS-CLIP	19536157
MIRT709548	hsa-miR-302e	HITS-CLIP	19536157
MIRT709547	hsa-miR-372-3p	HITS-CLIP	19536157
MIRT709546	hsa-miR-373-3p	HITS-CLIP	19536157
MIRT709545	hsa-miR-520a-3p	HITS-CLIP	19536157
MIRT709544	hsa-miR-520b	HITS-CLIP	19536157
MIRT709543	hsa-miR-520c-3p	HITS-CLIP	19536157
MIRT709542	hsa-miR-520d-3p	HITS-CLIP	19536157
MIRT709541	hsa-miR-520e	HITS-CLIP	19536157
MIRT709540	hsa-miR-512-3p	HITS-CLIP	19536157
MIRT709539	hsa-miR-520g-3p	HITS-CLIP	19536157
MIRT709538	hsa-miR-520h	HITS-CLIP	19536157
MIRT709537	hsa-miR-186-3p	HITS-CLIP	19536157
MIRT709536	hsa-miR-1224-3p	HITS-CLIP	19536157
MIRT709535	hsa-miR-1234-3p	HITS-CLIP	19536157
MIRT709534	hsa-miR-7107-5p	HITS-CLIP	19536157
MIRT709533	hsa-miR-150-5p	HITS-CLIP	19536157
MIRT709532	hsa-miR-6778-3p	HITS-CLIP	19536157
MIRT644900	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT644899	hsa-miR-4762-5p	HITS-CLIP	23824327
MIRT644898	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT644897	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT644896	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT644895	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT644894	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT644893	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT644892	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644891	hsa-miR-3124-3p	HITS-CLIP	23824327
MIRT644890	hsa-miR-513c-5p	HITS-CLIP	23824327
MIRT644889	hsa-miR-514b-5p	HITS-CLIP	23824327
MIRT709560	hsa-miR-106a-5p	HITS-CLIP	19536157
MIRT709559	hsa-miR-106b-5p	HITS-CLIP	19536157
MIRT709558	hsa-miR-17-5p	HITS-CLIP	19536157
MIRT709557	hsa-miR-20a-5p	HITS-CLIP	19536157
MIRT709556	hsa-miR-20b-5p	HITS-CLIP	19536157
MIRT709555	hsa-miR-519d-3p	HITS-CLIP	19536157
MIRT709554	hsa-miR-526b-3p	HITS-CLIP	19536157
MIRT709553	hsa-miR-93-5p	HITS-CLIP	19536157
MIRT709552	hsa-miR-302a-3p	HITS-CLIP	19536157
MIRT709551	hsa-miR-302b-3p	HITS-CLIP	19536157
MIRT709550	hsa-miR-302c-3p	HITS-CLIP	19536157
MIRT709549	hsa-miR-302d-3p	HITS-CLIP	19536157
MIRT709548	hsa-miR-302e	HITS-CLIP	19536157
MIRT709547	hsa-miR-372-3p	HITS-CLIP	19536157
MIRT709546	hsa-miR-373-3p	HITS-CLIP	19536157
MIRT709545	hsa-miR-520a-3p	HITS-CLIP	19536157
MIRT709544	hsa-miR-520b	HITS-CLIP	19536157
MIRT709543	hsa-miR-520c-3p	HITS-CLIP	19536157
MIRT709542	hsa-miR-520d-3p	HITS-CLIP	19536157
MIRT709541	hsa-miR-520e	HITS-CLIP	19536157
MIRT709540	hsa-miR-512-3p	HITS-CLIP	19536157
MIRT709539	hsa-miR-520g-3p	HITS-CLIP	19536157
MIRT709538	hsa-miR-520h	HITS-CLIP	19536157
MIRT709537	hsa-miR-186-3p	HITS-CLIP	19536157
MIRT709536	hsa-miR-1224-3p	HITS-CLIP	19536157
MIRT709535	hsa-miR-1234-3p	HITS-CLIP	19536157
MIRT709534	hsa-miR-7107-5p	HITS-CLIP	19536157
MIRT709533	hsa-miR-150-5p	HITS-CLIP	19536157
MIRT709532	hsa-miR-6778-3p	HITS-CLIP	19536157
MIRT644900	hsa-miR-216b-5p	HITS-CLIP	23824327
MIRT644899	hsa-miR-4762-5p	HITS-CLIP	23824327
MIRT644898	hsa-miR-6892-3p	HITS-CLIP	23824327
MIRT644897	hsa-miR-371b-5p	HITS-CLIP	23824327
MIRT644896	hsa-miR-373-5p	HITS-CLIP	23824327
MIRT644895	hsa-miR-616-5p	HITS-CLIP	23824327
MIRT644894	hsa-miR-371a-5p	HITS-CLIP	23824327
MIRT644893	hsa-miR-372-5p	HITS-CLIP	23824327
MIRT644892	hsa-miR-1304-3p	HITS-CLIP	23824327
MIRT644891	hsa-miR-3124-3p	HITS-CLIP	23824327
MIRT644890	hsa-miR-513c-5p	HITS-CLIP	23824327
MIRT644889	hsa-miR-514b-5p	HITS-CLIP	23824327
MIRT1501640	hsa-miR-1587	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501642	hsa-miR-330-3p	CLIP-seq
MIRT1501643	hsa-miR-4422	CLIP-seq
MIRT1501644	hsa-miR-4492	CLIP-seq
MIRT1501645	hsa-miR-4498	CLIP-seq
MIRT1501646	hsa-miR-4656	CLIP-seq
MIRT1501647	hsa-miR-4675	CLIP-seq
MIRT1501648	hsa-miR-4699-3p	CLIP-seq
MIRT1501649	hsa-miR-4741	CLIP-seq
MIRT1501650	hsa-miR-545	CLIP-seq
MIRT1501651	hsa-miR-555	CLIP-seq
MIRT1501652	hsa-miR-762	CLIP-seq
MIRT1501653	hsa-miR-1207-3p	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501655	hsa-miR-1236	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT1501660	hsa-miR-132	CLIP-seq
MIRT1501661	hsa-miR-1343	CLIP-seq
MIRT1501662	hsa-miR-135a	CLIP-seq
MIRT1501663	hsa-miR-135b	CLIP-seq
MIRT1501664	hsa-miR-139-3p	CLIP-seq
MIRT1501665	hsa-miR-146a	CLIP-seq
MIRT1501666	hsa-miR-146b-5p	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT1501668	hsa-miR-1913	CLIP-seq
MIRT1501669	hsa-miR-1915	CLIP-seq
MIRT1501670	hsa-miR-1976	CLIP-seq
MIRT1501671	hsa-miR-2052	CLIP-seq
MIRT1501672	hsa-miR-2053	CLIP-seq
MIRT1501673	hsa-miR-212	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501676	hsa-miR-28-5p	CLIP-seq
MIRT1501677	hsa-miR-299-5p	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501680	hsa-miR-3139	CLIP-seq
MIRT1501681	hsa-miR-3140-3p	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501683	hsa-miR-3150b-3p	CLIP-seq
MIRT1501684	hsa-miR-3155	CLIP-seq
MIRT1501685	hsa-miR-3155b	CLIP-seq
MIRT1501686	hsa-miR-3187-3p	CLIP-seq
MIRT1501687	hsa-miR-3194-3p	CLIP-seq
MIRT1501688	hsa-miR-324-3p	CLIP-seq
MIRT1501689	hsa-miR-326	CLIP-seq
MIRT1501642	hsa-miR-330-3p	CLIP-seq
MIRT1501690	hsa-miR-330-5p	CLIP-seq
MIRT1501691	hsa-miR-346	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501693	hsa-miR-3646	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT1501696	hsa-miR-3662	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT1501698	hsa-miR-3672	CLIP-seq
MIRT1501699	hsa-miR-378g	CLIP-seq
MIRT1501700	hsa-miR-3944-5p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT1501703	hsa-miR-4270	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501705	hsa-miR-4288	CLIP-seq
MIRT1501706	hsa-miR-4294	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501643	hsa-miR-4422	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT1501711	hsa-miR-4435	CLIP-seq
MIRT1501712	hsa-miR-4437	CLIP-seq
MIRT1501713	hsa-miR-4441	CLIP-seq
MIRT1501714	hsa-miR-4514	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT1501717	hsa-miR-4674	CLIP-seq
MIRT1501718	hsa-miR-4689	CLIP-seq
MIRT1501719	hsa-miR-4690-5p	CLIP-seq
MIRT1501720	hsa-miR-4691-3p	CLIP-seq
MIRT1501721	hsa-miR-4692	CLIP-seq
MIRT1501648	hsa-miR-4699-3p	CLIP-seq
MIRT1501722	hsa-miR-4701-5p	CLIP-seq
MIRT1501723	hsa-miR-4709-5p	CLIP-seq
MIRT1501724	hsa-miR-4716-5p	CLIP-seq
MIRT1501725	hsa-miR-4720-5p	CLIP-seq
MIRT1501726	hsa-miR-4726-3p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT1501732	hsa-miR-4784	CLIP-seq
MIRT1501733	hsa-miR-4799-3p	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501735	hsa-miR-484	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT1501737	hsa-miR-513a-3p	CLIP-seq
MIRT1501650	hsa-miR-545	CLIP-seq
MIRT1501738	hsa-miR-548c-3p	CLIP-seq
MIRT1501739	hsa-miR-548s	CLIP-seq
MIRT1501651	hsa-miR-555	CLIP-seq
MIRT1501740	hsa-miR-588	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT1501742	hsa-miR-595	CLIP-seq
MIRT1501743	hsa-miR-610	CLIP-seq
MIRT1501744	hsa-miR-632	CLIP-seq
MIRT1501745	hsa-miR-649	CLIP-seq
MIRT1501746	hsa-miR-708	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT1501748	hsa-miR-885-3p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT2150811	hsa-miR-221	CLIP-seq
MIRT2150812	hsa-miR-222	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT2150815	hsa-miR-548v	CLIP-seq
MIRT2371350	hsa-miR-1180	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2371351	hsa-miR-1272	CLIP-seq
MIRT1501669	hsa-miR-1915	CLIP-seq
MIRT2371352	hsa-miR-197	CLIP-seq
MIRT1501670	hsa-miR-1976	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2150811	hsa-miR-221	CLIP-seq
MIRT2150812	hsa-miR-222	CLIP-seq
MIRT2371353	hsa-miR-224	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT2371355	hsa-miR-23a	CLIP-seq
MIRT2371356	hsa-miR-23b	CLIP-seq
MIRT2371357	hsa-miR-23c	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2371358	hsa-miR-298	CLIP-seq
MIRT2371359	hsa-miR-299-3p	CLIP-seq
MIRT1501641	hsa-miR-3120-3p	CLIP-seq
MIRT1501678	hsa-miR-3128	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT2371361	hsa-miR-3148	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501686	hsa-miR-3187-3p	CLIP-seq
MIRT2371362	hsa-miR-3190	CLIP-seq
MIRT1501687	hsa-miR-3194-3p	CLIP-seq
MIRT2371363	hsa-miR-320a	CLIP-seq
MIRT2371364	hsa-miR-320b	CLIP-seq
MIRT2371365	hsa-miR-320c	CLIP-seq
MIRT2371366	hsa-miR-320d	CLIP-seq
MIRT2371367	hsa-miR-320e	CLIP-seq
MIRT2371368	hsa-miR-335	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501697	hsa-miR-3663-5p	CLIP-seq
MIRT2371369	hsa-miR-3682-3p	CLIP-seq
MIRT2371370	hsa-miR-3692	CLIP-seq
MIRT2371371	hsa-miR-377	CLIP-seq
MIRT2371372	hsa-miR-378	CLIP-seq
MIRT2371373	hsa-miR-378b	CLIP-seq
MIRT2371374	hsa-miR-378c	CLIP-seq
MIRT2371375	hsa-miR-378d	CLIP-seq
MIRT2371376	hsa-miR-378e	CLIP-seq
MIRT2371377	hsa-miR-378f	CLIP-seq
MIRT2371378	hsa-miR-378h	CLIP-seq
MIRT2371379	hsa-miR-378i	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT2371380	hsa-miR-422a	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT2371382	hsa-miR-4330	CLIP-seq
MIRT2371383	hsa-miR-4429	CLIP-seq
MIRT1501711	hsa-miR-4435	CLIP-seq
MIRT2371384	hsa-miR-4445	CLIP-seq
MIRT2371385	hsa-miR-4491	CLIP-seq
MIRT2371386	hsa-miR-451b	CLIP-seq
MIRT2371387	hsa-miR-4643	CLIP-seq
MIRT2371388	hsa-miR-4657	CLIP-seq
MIRT2371389	hsa-miR-4664-3p	CLIP-seq
MIRT2371390	hsa-miR-4695-3p	CLIP-seq
MIRT1501722	hsa-miR-4701-5p	CLIP-seq
MIRT1501724	hsa-miR-4716-5p	CLIP-seq
MIRT1501726	hsa-miR-4726-3p	CLIP-seq
MIRT1501728	hsa-miR-4755-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT1501731	hsa-miR-4781-3p	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT2371392	hsa-miR-498	CLIP-seq
MIRT2371393	hsa-miR-5096	CLIP-seq
MIRT2371394	hsa-miR-520g	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501739	hsa-miR-548s	CLIP-seq
MIRT2150815	hsa-miR-548v	CLIP-seq
MIRT1501740	hsa-miR-588	CLIP-seq
MIRT2371396	hsa-miR-760	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT2397174	hsa-miR-1227	CLIP-seq
MIRT2397175	hsa-miR-149	CLIP-seq
MIRT2397176	hsa-miR-3064-5p	CLIP-seq
MIRT2397177	hsa-miR-3126-3p	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2397178	hsa-miR-4715-3p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501661	hsa-miR-1343	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT1501699	hsa-miR-378g	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT1501712	hsa-miR-4437	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501717	hsa-miR-4674	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2463766	hsa-miR-720	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2664729	hsa-miR-1254	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT2664730	hsa-miR-1292	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT2664731	hsa-miR-1307	CLIP-seq
MIRT2664732	hsa-miR-141	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT2664733	hsa-miR-1537	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT2664734	hsa-miR-200a	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT2371355	hsa-miR-23a	CLIP-seq
MIRT2371356	hsa-miR-23b	CLIP-seq
MIRT2371357	hsa-miR-23c	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2664735	hsa-miR-3116	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT2664736	hsa-miR-3154	CLIP-seq
MIRT2664737	hsa-miR-3160-3p	CLIP-seq
MIRT2664738	hsa-miR-3170	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT2664739	hsa-miR-3653	CLIP-seq
MIRT2664740	hsa-miR-3658	CLIP-seq
MIRT2664741	hsa-miR-3664-3p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT2664742	hsa-miR-4254	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT2664743	hsa-miR-4305	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2664744	hsa-miR-4433	CLIP-seq
MIRT2664745	hsa-miR-4436a	CLIP-seq
MIRT2664746	hsa-miR-4459	CLIP-seq
MIRT2664747	hsa-miR-4481	CLIP-seq
MIRT2664748	hsa-miR-451	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT2664749	hsa-miR-4638-5p	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2664750	hsa-miR-4667-3p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2664751	hsa-miR-4690-3p	CLIP-seq
MIRT1501720	hsa-miR-4691-3p	CLIP-seq
MIRT2664752	hsa-miR-4713-5p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT2664753	hsa-miR-4745-5p	CLIP-seq
MIRT2664754	hsa-miR-4753-3p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2664755	hsa-miR-4758-5p	CLIP-seq
MIRT2664756	hsa-miR-4761-3p	CLIP-seq
MIRT2664757	hsa-miR-4768-3p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT2664758	hsa-miR-4779	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT2664759	hsa-miR-511	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2664760	hsa-miR-615-5p	CLIP-seq
MIRT2664761	hsa-miR-635	CLIP-seq
MIRT2664762	hsa-miR-661	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq
MIRT1501654	hsa-miR-122	CLIP-seq
MIRT1501656	hsa-miR-1253	CLIP-seq
MIRT2664729	hsa-miR-1254	CLIP-seq
MIRT1501657	hsa-miR-125a-5p	CLIP-seq
MIRT1501658	hsa-miR-125b	CLIP-seq
MIRT1501659	hsa-miR-1301	CLIP-seq
MIRT2664731	hsa-miR-1307	CLIP-seq
MIRT2664732	hsa-miR-141	CLIP-seq
MIRT1501667	hsa-miR-1470	CLIP-seq
MIRT2664733	hsa-miR-1537	CLIP-seq
MIRT2463765	hsa-miR-1910	CLIP-seq
MIRT2664734	hsa-miR-200a	CLIP-seq
MIRT1501674	hsa-miR-214	CLIP-seq
MIRT2371354	hsa-miR-2355-5p	CLIP-seq
MIRT1501675	hsa-miR-24	CLIP-seq
MIRT2664735	hsa-miR-3116	CLIP-seq
MIRT1501679	hsa-miR-3135b	CLIP-seq
MIRT2371360	hsa-miR-3143	CLIP-seq
MIRT1501682	hsa-miR-3149	CLIP-seq
MIRT2664737	hsa-miR-3160-3p	CLIP-seq
MIRT2664738	hsa-miR-3170	CLIP-seq
MIRT1501692	hsa-miR-3619-5p	CLIP-seq
MIRT1501694	hsa-miR-3652	CLIP-seq
MIRT1501695	hsa-miR-3655	CLIP-seq
MIRT2664741	hsa-miR-3664-3p	CLIP-seq
MIRT1501701	hsa-miR-411	CLIP-seq
MIRT1501702	hsa-miR-4251	CLIP-seq
MIRT2664742	hsa-miR-4254	CLIP-seq
MIRT1501704	hsa-miR-4284	CLIP-seq
MIRT2371381	hsa-miR-4291	CLIP-seq
MIRT2664743	hsa-miR-4305	CLIP-seq
MIRT1501707	hsa-miR-4319	CLIP-seq
MIRT1501708	hsa-miR-4324	CLIP-seq
MIRT1501709	hsa-miR-4327	CLIP-seq
MIRT1501710	hsa-miR-4430	CLIP-seq
MIRT2664745	hsa-miR-4436a	CLIP-seq
MIRT2664747	hsa-miR-4481	CLIP-seq
MIRT1501715	hsa-miR-455-3p	CLIP-seq
MIRT1501716	hsa-miR-4633-3p	CLIP-seq
MIRT2664749	hsa-miR-4638-5p	CLIP-seq
MIRT2150813	hsa-miR-4645-5p	CLIP-seq
MIRT2664750	hsa-miR-4667-3p	CLIP-seq
MIRT2150814	hsa-miR-4673	CLIP-seq
MIRT2664751	hsa-miR-4690-3p	CLIP-seq
MIRT2664752	hsa-miR-4713-5p	CLIP-seq
MIRT1501727	hsa-miR-4735-5p	CLIP-seq
MIRT2664753	hsa-miR-4745-5p	CLIP-seq
MIRT2397179	hsa-miR-4757-5p	CLIP-seq
MIRT2664755	hsa-miR-4758-5p	CLIP-seq
MIRT1501729	hsa-miR-4772-3p	CLIP-seq
MIRT1501730	hsa-miR-4775	CLIP-seq
MIRT2371391	hsa-miR-4778-5p	CLIP-seq
MIRT2397180	hsa-miR-4794	CLIP-seq
MIRT1501734	hsa-miR-483-5p	CLIP-seq
MIRT1501736	hsa-miR-5047	CLIP-seq
MIRT2371395	hsa-miR-543	CLIP-seq
MIRT1501741	hsa-miR-590-3p	CLIP-seq
MIRT2664760	hsa-miR-615-5p	CLIP-seq
MIRT2664761	hsa-miR-635	CLIP-seq
MIRT2664762	hsa-miR-661	CLIP-seq
MIRT2463766	hsa-miR-720	CLIP-seq
MIRT1501747	hsa-miR-761	CLIP-seq
MIRT2371397	hsa-miR-922	CLIP-seq

Gene ontology (GO)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000785	Component	Chromatin	ISA
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IDA	17220279
GO:0000981	Function	DNA-binding transcription factor activity, RNA polymerase II-specific	ISA
GO:0001228	Function	DNA-binding transcription activator activity, RNA polymerase II-specific	IDA	17220279
GO:0003677	Function	DNA binding	IEA
GO:0003712	Function	Transcription coregulator activity	IDA	25210186
GO:0003713	Function	Transcription coactivator activity	IDA	27068747
GO:0003713	Function	Transcription coactivator activity	IMP	17209048
GO:0005515	Function	Protein binding	IPI	16713569, 17209048, 21516116, 21900206, 25210186, 25416956, 25910212, 27068747, 28514442, 32296183, 33961781
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IDA	17209048
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	TAS
GO:0005813	Component	Centrosome	IDA
GO:0006355	Process	Regulation of DNA-templated transcription	IDA	25210186, 27068747
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0016605	Component	PML body	IDA	25210186, 27068747
GO:0016605	Component	PML body	IEA
GO:0016740	Function	Transferase activity	IEA
GO:0016925	Process	Protein sumoylation	IEA
GO:0016925	Process	Protein sumoylation	TAS
GO:0019789	Function	SUMO transferase activity	EXP	27068747
GO:0031965	Component	Nuclear membrane	IDA
GO:0042802	Function	Identical protein binding	IPI	17209048, 25416956, 32296183
GO:0043565	Function	Sequence-specific DNA binding	IDA	23332764
GO:0044828	Process	Host-mediated suppression of viral genome replication	IDA	25210186
GO:0045944	Process	Positive regulation of transcription by RNA polymerase II	IDA	17220279
GO:0046872	Function	Metal ion binding	IEA
GO:0046983	Function	Protein dimerization activity	IEA
GO:0061665	Function	SUMO ligase activity	IDA	27068747
GO:1990466	Process	Protein autosumoylation	IMP	27068747
GO:1990837	Function	Sequence-specific double-stranded DNA binding	IDA	28473536

Other IDs

• MIM: 300178
• HGNC: 447
• e!Ensembl: ENSG00000214717

Protein

• UniProt ID: O96006
• Protein name: E3 SUMO-protein ligase ZBED1 (EC 2.3.2.-) (DNA replication-related element-binding factor) (Putative Ac-like transposable element) (Zinc finger BED domain-containing protein 1) (dREF homolog)
• Protein function: Functions as an E3-type small ubiquitin-like modifier (SUMO) ligase which sumoylates CHD3/Mi2-alpha, causing its release from DNA (PubMed:27068747). This results in suppression of CHD3/Mi2-alpha transcription repression, increased recruitment of
• PDB: 2CT5
• Family and domains:

  Pfam

  Accession	ID	Position in sequence	Description	Type
  PF02892	zf-BED	23 → 72	BED zinc finger	Domain
  PF05699	Dimer_Tnp_hAT	571 → 651	hAT family C-terminal dimerisation region	Domain

• Tissue specificity: TISSUE SPECIFICITY: Ubiquitously expressed at low levels (PubMed:9887332). Expression is highest in skeletal muscle, heart, spleen and placenta (PubMed:9887332). {ECO:0000269|PubMed:9887332}.
• Sequence:

  MENKSLESSQTDLKLVAHPRAKSKVWKYFGFDTNAEGCILQWKKIYCRICMAQIAYSGNT
  SNLSYHLEKNHPEEFCEFVKSNTEQMREAFATAFSKLKPESSQQPGQDALAVKAGHGYDS
  KKQQELTAAVLGLICEGLYPASIVDEPTFKVLLKTADPRYELPSRKYISTKAIPEKYGAV
  REVILKELAEATWCGISTDMWRSENQNRAYVTLAAHFLGLGAPNCLSMGSRCLKTFEVPE
  ENTAETITRVLYEVFIEWGISAKVFGATTNYGKDIVKACSLLDVAVHMPCLGHTFNAGIQ
  QAFQLPKLGALLSRCRKLVEYFQQSAVAMYMLYEKQKQQNVAHCMLVSNRVSWWGSTLAM
  LQRLKEQQFVIAGVLVEDSNNHHLMLEASEWATIEGLVELLQPFKQVAEMLSASRYPTIS
  MVKPLLHMLLNTTLNIKETDSKELSMAKEVIAKELSKTYQETPEIDMFLNVATFLDPRYK
  RLPFLSAFERQQVENRVVEEAKGLLDKVKDGGYRPAEDKIFPVPEEPPVKKLMRTSTPPP
  ASVINNMLAEIFCQTGGVEDQEEWHAQVVEELSNFKSQKVLGLNEDPLKWWSDRLALFPL
  LPKVLQKYWCVTATRVAPERLFGSAANVVSAKRNRLAPAHVDEQVFLYENARSGAEAEPE
  DQDEGEWGLDQEQVFSLGDGVSGGFFGIRDSSFL

• Sequence length: 694

Pathways

Reactome:

SUMOylation of chromatin organization proteins