Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	79585
Gene name Gene Name - the full gene name approved by the HGNC.	Coronin 7
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	CORO7
Synonyms (NCBI Gene) Gene synonyms aliases	0610011B16Rik, CRN7, POD1
Chromosome Chromosome number	16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	16p13.3
Summary Summary of gene provided in NCBI Entrez Gene.	This gene encodes a member of the coronin protein family. However, unlike other coronin proteins, it is not an actin-binding protein but rather functions as an F-actin regulator directing anterograde Golgi to endosome transport. The encoded protein has tw

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miRTarBase ID	miRNA	Experiments	Reference
MIRT018155	hsa-miR-335-5p	Microarray	18185580
MIRT049245	hsa-miR-92a-3p	CLASH	23622248
MIRT696403	hsa-miR-606	HITS-CLIP	23313552
MIRT696402	hsa-miR-4781-3p	HITS-CLIP	23313552
MIRT696401	hsa-miR-4716-5p	HITS-CLIP	23313552
MIRT696400	hsa-miR-3663-5p	HITS-CLIP	23313552
MIRT696398	hsa-miR-4635	HITS-CLIP	23313552
MIRT696399	hsa-miR-4755-3p	HITS-CLIP	23313552
MIRT696397	hsa-miR-6131	HITS-CLIP	23313552
MIRT696396	hsa-miR-7158-3p	HITS-CLIP	23313552
MIRT696395	hsa-miR-203b-3p	HITS-CLIP	23313552
MIRT696394	hsa-miR-548s	HITS-CLIP	23313552
MIRT696393	hsa-miR-4701-5p	HITS-CLIP	23313552
MIRT696392	hsa-miR-588	HITS-CLIP	23313552
MIRT696391	hsa-miR-4435	HITS-CLIP	23313552
MIRT696390	hsa-miR-3187-3p	HITS-CLIP	23313552
MIRT484652	hsa-miR-140-3p	PAR-CLIP	23592263
MIRT484651	hsa-miR-6865-3p	PAR-CLIP	23592263
MIRT484650	hsa-miR-3620-3p	PAR-CLIP	23592263
MIRT484649	hsa-miR-3151-3p	PAR-CLIP	23592263
MIRT484648	hsa-miR-3192-3p	PAR-CLIP	23592263
MIRT696403	hsa-miR-606	HITS-CLIP	23313552
MIRT696402	hsa-miR-4781-3p	HITS-CLIP	23313552
MIRT696401	hsa-miR-4716-5p	HITS-CLIP	23313552
MIRT696400	hsa-miR-3663-5p	HITS-CLIP	23313552
MIRT696398	hsa-miR-4635	HITS-CLIP	23313552
MIRT696399	hsa-miR-4755-3p	HITS-CLIP	23313552
MIRT696397	hsa-miR-6131	HITS-CLIP	23313552
MIRT696396	hsa-miR-7158-3p	HITS-CLIP	23313552
MIRT696395	hsa-miR-203b-3p	HITS-CLIP	23313552
MIRT696394	hsa-miR-548s	HITS-CLIP	23313552
MIRT696393	hsa-miR-4701-5p	HITS-CLIP	23313552
MIRT696392	hsa-miR-588	HITS-CLIP	23313552
MIRT696391	hsa-miR-4435	HITS-CLIP	23313552
MIRT696390	hsa-miR-3187-3p	HITS-CLIP	23313552
MIRT484652	hsa-miR-140-3p	PAR-CLIP	23592263
MIRT484651	hsa-miR-6865-3p	PAR-CLIP	23592263
MIRT484650	hsa-miR-3620-3p	PAR-CLIP	23592263
MIRT484649	hsa-miR-3151-3p	PAR-CLIP	23592263
MIRT484648	hsa-miR-3192-3p	PAR-CLIP	23592263
MIRT904758	hsa-miR-125a-3p	CLIP-seq
MIRT904759	hsa-miR-1294	CLIP-seq
MIRT904760	hsa-miR-2114	CLIP-seq
MIRT904761	hsa-miR-3665	CLIP-seq
MIRT904762	hsa-miR-3689d	CLIP-seq
MIRT904763	hsa-miR-4466	CLIP-seq
MIRT904764	hsa-miR-4476	CLIP-seq
MIRT904765	hsa-miR-4488	CLIP-seq
MIRT904766	hsa-miR-4640-5p	CLIP-seq
MIRT904767	hsa-miR-4697-5p	CLIP-seq
MIRT904768	hsa-miR-4710	CLIP-seq
MIRT904769	hsa-miR-4726-5p	CLIP-seq
MIRT904770	hsa-miR-4736	CLIP-seq
MIRT904771	hsa-miR-4767	CLIP-seq
MIRT904772	hsa-miR-4795-5p	CLIP-seq
MIRT904773	hsa-miR-552	CLIP-seq
MIRT904774	hsa-miR-675	CLIP-seq
MIRT904775	hsa-miR-764	CLIP-seq
MIRT904776	hsa-miR-885-3p	CLIP-seq
MIRT1968323	hsa-miR-3130-3p	CLIP-seq
MIRT1968324	hsa-miR-3146	CLIP-seq
MIRT1968325	hsa-miR-331-3p	CLIP-seq
MIRT1968326	hsa-miR-3620	CLIP-seq
MIRT1968327	hsa-miR-4258	CLIP-seq
MIRT904768	hsa-miR-4710	CLIP-seq
MIRT1968328	hsa-miR-621	CLIP-seq
MIRT1968329	hsa-miR-628-5p	CLIP-seq
MIRT904759	hsa-miR-1294	CLIP-seq
MIRT2204144	hsa-miR-15a	CLIP-seq
MIRT2204145	hsa-miR-15b	CLIP-seq
MIRT2204146	hsa-miR-16	CLIP-seq
MIRT2204147	hsa-miR-195	CLIP-seq
MIRT904762	hsa-miR-3689d	CLIP-seq
MIRT2204148	hsa-miR-424	CLIP-seq
MIRT2204149	hsa-miR-4468	CLIP-seq
MIRT904765	hsa-miR-4488	CLIP-seq
MIRT904767	hsa-miR-4697-5p	CLIP-seq
MIRT904768	hsa-miR-4710	CLIP-seq
MIRT2204150	hsa-miR-497	CLIP-seq
MIRT904759	hsa-miR-1294	CLIP-seq
MIRT904762	hsa-miR-3689d	CLIP-seq
MIRT904765	hsa-miR-4488	CLIP-seq
MIRT904767	hsa-miR-4697-5p	CLIP-seq
MIRT904768	hsa-miR-4710	CLIP-seq

Show/Hide all(14)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000139	Component	Golgi membrane	IEA
GO:0003779	Function	Actin binding	IDA	24768539
GO:0005515	Function	Protein binding	IPI	21130766, 24768539
GO:0005794	Component	Golgi apparatus	ISS
GO:0005802	Component	Trans-Golgi network	IDA	24768539
GO:0005829	Component	Cytosol	IEA
GO:0006895	Process	Golgi to endosome transport	IMP	24768539
GO:0007015	Process	Actin filament organization	IBA	21873635
GO:0015031	Process	Protein transport	IEA
GO:0016020	Component	Membrane	HDA	19946888
GO:0016021	Component	Integral component of membrane	ISS
GO:0030041	Process	Actin filament polymerization	IMP	24768539
GO:0031410	Component	Cytoplasmic vesicle	IEA
GO:0051015	Function	Actin filament binding	IBA	21873635

MIM	HGNC	e!Ensembl
611668	26161	ENSG00000262246

Protein

UniProt ID

P57737

Protein name

Coronin-7 (Crn7) (70 kDa WD repeat tumor rejection antigen homolog)

Protein function

F-actin regulator involved in anterograde Golgi to endosome transport: upon ubiquitination via 'Lys-33'-linked ubiquitin chains by the BCR(KLHL20) E3 ubiquitin ligase complex, interacts with EPS15 and localizes to the trans-Golgi network, where

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF08953	DUF1899	2 → 65	Domain of unknown function (DUF1899)	Domain
PF00400	WD40	67 → 106	WD domain, G-beta repeat	Repeat
PF00400	WD40	158 → 196	WD domain, G-beta repeat	Repeat
PF16300	WD40_4	338 → 380		Repeat
PF08953	DUF1899	468 → 532	Domain of unknown function (DUF1899)	Domain
PF00400	WD40	584 → 623	WD domain, G-beta repeat	Repeat
PF00400	WD40	629 → 665	WD domain, G-beta repeat	Repeat
PF16300	WD40_4	808 → 852		Repeat

Tissue specificity

TISSUE SPECIFICITY: Widely expressed. Expressed in the spleen, peripheral leukocytes, testes, brain, thymus and small intestine. {ECO:0000269|PubMed:21130766}.

Sequence

MNRFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPGVLGIVPL
QGQGEDKRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPGQALPSAPGV
VLGPEDLPVEVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDG
ALVGTACKDKQLRIFDPRTKPRASQSTQAHENSRDSRLAWMGTWEHLVSTGFNQMREREV
KLWDTRFFSSALASLTLDTSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPV
TQCVLESVLRGAALVPRQALAVMSCEVLRVLQLSDTAIVPIGYHVPRKAVEFHEDLFPDT
AGCVPATDPHSWWAGDNQQVQKVSLNPACRPHPSFTSCLVPPAEPLPDTAQPAVMETPVG
DADASEGFSSPPSSLTSPSTPSSLGPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTV
LHRDSHITNLKGLNLTTPGESDGFCANKLRVAVPLLSSGGQVAVLELRKPGRLPDTALPT
LQNGAAVTDLAWDPFDPHRLAVAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSL
RFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQQLATVCKDGR
VRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALAGG
PLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFFLECNSFTSPDPHK
GLVLLPKTECDVREVELMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTAVIWEPVLS
AEAWLQGANGQPWLLSLQPPDMSPVSQAPREAPARRAPSSAQYLEEKSDQQKKEELLNAM
VAKLGNREDPLPQDSFEGVDEDEWD

Sequence length

925

Interactions

View interactions

Show/Hide Causal Diseases (1)

Disease term	Disease name	dbSNP ID	References
Causal
Schizophrenia	Schizophrenia	rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346 View all (12 more)	28991256, 30285260

Show/Hide Unknown Diseases (3)

Disease term	Disease name	Evidence	Source
Unknown
Diabetes	Diabetes		GWAS
Prostate cancer	Prostate cancer	Together, these results show that PRRX2 is an oncogene and might play a role in the aggressiveness of PC within the DNPC population.	GWAS, CBGDA
Coronary Heart Disease	Coronary Heart Disease		GWAS

Show/Hide Text Mining Associations (2)

Disease Name	Relationship Type	References
Associations from Text Mining
Carcinoma Pancreatic Ductal	Associate	37239355
Squamous Cell Carcinoma of Head and Neck	Associate	34884487

CORO7 (coronin 7)