Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7804
Gene name Gene Name - the full gene name approved by the HGNC.
LDL receptor related protein 8
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
LRP8
Synonyms (NCBI Gene) Gene synonyms aliases
APOER2, HSZ75190, LRP-8, MCI1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
MCI1
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p32.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the low density lipoprotein receptor (LDLR) family. Low density lipoprotein receptors are cell surface proteins that play roles in both signal transduction and receptor-mediated endocytosis of specific ligands for lysosomal d
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs5174 C>T Risk-factor Genic downstream transcript variant, coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT020152 hsa-miR-130b-3p Sequencing 20371350
MIRT024366 hsa-miR-215-5p Microarray 19074876
MIRT026507 hsa-miR-192-5p Microarray 19074876
MIRT031127 hsa-miR-19b-3p Sequencing 20371350
MIRT046111 hsa-miR-30b-5p CLASH 23622248
Transcription factors
Transcription factor Regulation Reference
HIC1 Repression 24076391
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001523 Process Retinoid metabolic process TAS
GO:0001540 Function Amyloid-beta binding IEA
GO:0004888 Function Transmembrane signaling receptor activity TAS 8626535
GO:0005041 Function Low-density lipoprotein particle receptor activity TAS 20005821
GO:0005509 Function Calcium ion binding IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602600 6700 ENSG00000157193
Protein
UniProt ID Q14114
Protein name Low-density lipoprotein receptor-related protein 8 (LRP-8) (Apolipoprotein E receptor 2)
Protein function Cell surface receptor for Reelin (RELN) and apolipoprotein E (apoE)-containing ligands (PubMed:12899622, PubMed:12950167, PubMed:20223215, PubMed:30873003). LRP8 participates in transmitting the extracellular Reelin signal to intracellular signa
PDB 3A7Q , 5B4X , 5B4Y , 7UCX
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00057 Ldl_recept_a 45 81 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 84 122 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 125 163 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 165 201 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 204 245 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 257 294 Low-density lipoprotein receptor domain class A Repeat
PF00057 Ldl_recept_a 297 333 Low-density lipoprotein receptor domain class A Repeat
PF14670 FXa_inhibition 340 374 Domain
PF00058 Ldl_recept_b 462 506 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 509 549 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 552 593 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 596 638 Low-density lipoprotein receptor repeat class B Repeat
PF00058 Ldl_recept_b 639 679 Low-density lipoprotein receptor repeat class B Repeat
Tissue specificity TISSUE SPECIFICITY: Expressed mainly in brain and placenta. Also expressed in platelets and megakaryocytic cells. Not expressed in the liver. {ECO:0000269|PubMed:10218790, ECO:0000269|PubMed:10508213}.
Sequence
MGLPEPGPLRLLALLLLLLLLLLLQLQHLAAAAADPLLGGQGPAKDCEKDQFQCRNERCI
PSVWRCDEDDDCLDHSDEDDC
PKKTCADSDFTCDNGHCIHERWKCDGEEECPDGSDESEA
TC
TKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCATLCAPHEFQCGNRSCL
AAVFVCDGDDDCGDGSDERGC
ADPACGPREFRCGGDGGGACIPERWVCDRQFDCEDRSDE
AAELC
GRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCKDKSDEADCPLGTCR
GDEFQCGDGTCVLAIKHCNQEQDCPDGSDEAGC
LQGLNECLHNNGGCSHICTDLKIGFEC
TCPAGFQLLDQKTC
GDIDECKDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAAGK
SPSLIFTNRHEVRRIDLVKRNYSRLIPMLKNVVALDVEVATNRIYWCDLSYRKIYSAYMD
KASDPKEQEVLIDEQLHSPEGLAVDW
VHKHIYWTDSGNKTISVATVDGGRRRTLFSRNLS
EPRAIAVDP
LRGFMYWSDWGDQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYW
VDSKLHQLSSIDFSGGNRKTLISSTDFLSHPFGIAVFE
DKVFWTDLENEAIFSANRLNGL
EISILAENLNNPHDIVIFH
ELKQPRAPDACELSVQPNGGCEYLCLPAPQISSHSPKYTCA
CPDTMWLGPDMKRCYRAPQSTSTTTLASTMTRTVPATTRAPGTTVHRSTYQNHSTETPSL
TAAVPSSVSVPRAPSISPSTLSPATSNHSQHYANEDSKMGSTVTAAVIGIIVPIVVIALL
CMSGYLIWRNWKRKNTKSMNFDNPVYRKTTEEEDEDELHIGRTAQIGHVYPAAISSFDRP
LWAEPCLGETREPEDPAPALKELFVLPGEPRSQLHQLPKNPLSELPVVKSKRVALSLEDD
GLP
Sequence length 963
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Platelet sensitization by LDL
Retinoid metabolism and transport
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Schizophrenia Schizophrenia rs13447324, rs387906932, rs387906933, rs863223354, rs863223355, rs776061422, rs863223349, rs748809996, rs759748655, rs863223353, rs863223350, rs863223356, rs781821239, rs863223348, rs863223346
View all (12 more)
17936586, 22419519
Unknown
Disease term Disease name Evidence References Source
Mental depression Unipolar Depression, Major Depressive Disorder 20493228 ClinVar
Myocardial infarction Myocardial Infarction ClinVar
Diabetes Diabetes GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 35466940, 35886870, 38093390
Autistic Disorder Associate 36039581
Behcet Syndrome Inhibit 39191728
Bipolar Disorder Associate 39191728
Blood Platelet Disorders Associate 10508213
Carcinoma Non Small Cell Lung Stimulate 35246020
Cognition Disorders Associate 38093390
Colorectal Neoplasms Associate 37770979
Coronary Artery Disease Associate 17847002, 23524007, 24867879
Coronary Artery Disease Autosomal Dominant 1 Associate 24867879