Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7348
Gene name Gene Name - the full gene name approved by the HGNC.
Uroplakin 1B
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
UPK1B
Synonyms (NCBI Gene) Gene synonyms aliases
TSPAN20, UPIB, UPK1
Chromosome Chromosome number
3
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
3q13.32
Summary Summary of gene provided in NCBI Entrez Gene.
The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT1476246 hsa-miR-106a CLIP-seq
MIRT1476247 hsa-miR-106b CLIP-seq
MIRT1476248 hsa-miR-1224-3p CLIP-seq
MIRT1476249 hsa-miR-1225-3p CLIP-seq
MIRT1476250 hsa-miR-1233 CLIP-seq
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005198 Function Structural molecule activity NAS 9935153
GO:0005515 Function Protein binding IPI 32296183
GO:0005887 Component Integral component of plasma membrane IBA 21873635
GO:0009617 Process Response to bacterium IEA
GO:0016021 Component Integral component of membrane NAS 9818021, 9935153
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602380 12578 ENSG00000114638
Protein
UniProt ID O75841
Protein name Uroplakin-1b (UP1b) (Tetraspanin-20) (Tspan-20) (Uroplakin Ib) (UPIb)
Protein function Component of the asymmetric unit membrane (AUM); a highly specialized biomembrane elaborated by terminally differentiated urothelial cells. May play an important role in normal bladder epithelial physiology, possibly in regulating membrane perme
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00335 Tetraspanin 10 256 Tetraspanin family Family
Tissue specificity TISSUE SPECIFICITY: Bladder epithelium.
Sequence
Sequence length 260
Interactions View interactions
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
25330770
Breast carcinoma Breast Carcinoma rs80359671, rs11540652, rs28934575, rs28897672, rs137886232, rs193922376, rs80357783, rs80359306, rs80359405, rs80359507, rs80359598, rs80358429, rs397507683, rs397515636, rs80359451
View all (71 more)
25330770
Marfan syndrome Mammary Carcinoma, Human rs137854456, rs137854457, rs267606796, rs137854458, rs137854459, rs137854460, rs137854470, rs137854471, rs267606797, rs137854461, rs137854462, rs137854463, rs869025419, rs137854464, rs137854465
View all (942 more)
25330770
Associations from Text Mining
Disease Name Relationship Type References
Adenocarcinoma Associate 35550834
Adenocarcinoma of Lung Associate 35550834
Asthma Associate 30669148
Carcinoma Renal Cell Associate 33275221
Carcinoma Squamous Cell Associate 38114532
Carcinoma Transitional Cell Inhibit 15140401, 16354592
Carcinoma Transitional Cell Associate 9818021, 9846985
Colonic Neoplasms Associate 35550834
Cystitis Interstitial Associate 23670165, 32377607
Gastroesophageal Reflux Associate 35550834