Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7021
Gene name Gene Name - the full gene name approved by the HGNC.
Transcription factor AP-2 beta
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TFAP2B
Synonyms (NCBI Gene) Gene synonyms aliases
AP-2B, AP-2beta, AP2-B, PDA2
Disease Acronyms (UniProt) Disease acronyms from UniProt database
PDA2
Chromosome Chromosome number
6
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
6p12.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the AP-2 family of transcription factors. AP-2 proteins form homo- or hetero-dimers with other AP-2 family members and bind specific DNA sequences. They are thought to stimulate cell proliferation and suppress terminal differ
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs35649205 CACACA>-,CA,CACA,CACACACA Uncertain-significance, conflicting-interpretations-of-pathogenicity 3 prime UTR variant
rs80338910 C>G Pathogenic Intron variant, coding sequence variant, missense variant
rs80338911 G>A Pathogenic Intron variant
rs80338912 C>A,T Pathogenic Coding sequence variant, missense variant
rs80338914 C>A Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT017509 hsa-miR-335-5p Microarray 18185580
MIRT721702 hsa-miR-6733-3p HITS-CLIP 19536157
MIRT721701 hsa-miR-4302 HITS-CLIP 19536157
MIRT721700 hsa-miR-221-5p HITS-CLIP 19536157
MIRT721699 hsa-miR-8073 HITS-CLIP 19536157
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000122 Process Negative regulation of transcription by RNA polymerase II IDA 7559606
GO:0000122 Process Negative regulation of transcription by RNA polymerase II TAS
GO:0000785 Component Chromatin ISA
GO:0000977 Function RNA polymerase II transcription regulatory region sequence-specific DNA binding IBA 21873635
GO:0000978 Function RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA 7555706
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601601 11743 ENSG00000008196
Protein
UniProt ID Q92481
Protein name Transcription factor AP-2-beta (AP2-beta) (Activating enhancer-binding protein 2-beta)
Protein function Sequence-specific DNA-binding protein that interacts with inducible viral and cellular enhancer elements to regulate transcription of selected genes. AP-2 factors bind to the consensus sequence 5'-GCCNNNGGC-3' and activate genes involved in a la
PDB 8J0Q
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF03299 TF_AP-2 230 424 Transcription factor AP-2 Family
Sequence
MHSPPRDQAAIMLWKLVENVKYEDIYEDRHDGVPSHSSRLSQLGSVSQGPYSSAPPLSHT
PSSDFQPPYFPPPYQPLPYHQSQDPYSHVNDPYSLNPLHQPQQHPWGQRQRQEVGSEAGS
LLPQPRAALPQLSGLDPRRDYHSVRRPDVLLHSAHHGLDAGMGDSLSLHGLGHPGMEDVQ
SVEDANNSGMNLLDQSVIKKVPVPPKSVTSLMMNKDGFLGGMSVNTGEVFCSVPGRLSLL
SSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRSLRERLEKIGLNLPAGRR
KAANVTLLTSLVEGEAVHLARDFGYICETEFPAKAVSEYLNRQHTDPSDLHSRKNMLLAT
KQLCKEFTDLLAQDRTPIGNSRPSPILEPGIQSCLTHFSLITHGFGAPAICAALTALQNY
LTEA
LKGMDKMFLNNTTTNRHTSGEGPGSKTGDKEEKHRK
Sequence length 460
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Negative regulation of activity of TFAP2 (AP-2) family transcription factors
Activation of the TFAP2 (AP-2) family of transcription factors
TFAP2 (AP-2) family regulates transcription of growth factors and their receptors
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Char syndrome CHAR SYNDROME, Char syndrome rs80338914, rs80338917, rs80338912, rs80338915, rs80338910, rs80338911, rs1561964103 31292255, 15684060, 29555671, 11505339, 10955477, 10802654, 7645594
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Diabetes mellitus Diabetes Mellitus, Non-Insulin-Dependent rs587776515, rs61730328, rs606231121, rs606231122, rs79020217, rs77625743, rs78378398, rs606231123, rs1362648752, rs104893649, rs80356624, rs80356616, rs80356625, rs80356611, rs104894237
View all (293 more)
30595370
Mental retardation Mild Mental Retardation rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Unknown
Disease term Disease name Evidence References Source
Ptosis Blepharoptosis, Ptosis ClinVar
Diabetes Diabetes GWAS
Metabolic Syndrome Metabolic Syndrome GWAS
Bipolar Disorder Bipolar Disorder GWAS
Associations from Text Mining
Disease Name Relationship Type References
Abdominal Injuries Associate 31167208
Adenocarcinoma Associate 11429425
Amelogenesis imperfecta local hypoplastic form Associate 28381879
Anodontia Associate 28381879
Anorexia Associate 28948079
Aortic Valve Disease Associate 28381879
Bone Diseases Associate 15684060
Breast Carcinoma In Situ Associate 34117603
Breast Neoplasms Associate 34117603, 36533448
Bulimia Nervosa Associate 28948079