Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
7007
Gene name Gene Name - the full gene name approved by the HGNC.
Tectorin alpha
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TECTA
Synonyms (NCBI Gene) Gene synonyms aliases
DFNA12, DFNA8, DFNB21
Disease Acronyms (UniProt) Disease acronyms from UniProt database
DFNA12, DFNB21
Chromosome Chromosome number
11
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
11q23.3
Summary Summary of gene provided in NCBI Entrez Gene.
The tectorial membrane is an extracellular matrix of the inner ear that contacts the stereocilia bundles of specialized sensory hair cells. Sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia, and leads
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121909058 A>G Pathogenic Coding sequence variant, missense variant
rs121909059 T>A Pathogenic Coding sequence variant, missense variant
rs121909060 G>C Pathogenic Coding sequence variant, missense variant
rs121909061 T>C,G Pathogenic Coding sequence variant, missense variant
rs121909062 G>A Uncertain-significance, pathogenic Coding sequence variant, missense variant
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005201 Function Extracellular matrix structural constituent IEA
GO:0005576 Component Extracellular region TAS
GO:0005886 Component Plasma membrane TAS
GO:0007160 Process Cell-matrix adhesion IEA
GO:0007605 Process Sensory perception of sound IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602574 11720 ENSG00000109927
Protein
UniProt ID O75443
Protein name Alpha-tectorin
Protein function One of the major non-collagenous components of the tectorial membrane (By similarity). The tectorial membrane is an extracellular matrix of the inner ear that covers the neuroepithelium of the cochlea and contacts the stereocilia bundles of spec
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF06119 NIDO 163 251 Nidogen-like Family
PF00094 VWD 322 478 von Willebrand factor type D domain Family
PF08742 C8 523 591 C8 domain Domain
PF01826 TIL 597 650 Trypsin Inhibitor like cysteine rich domain Domain
PF12714 TILa 651 706 TILa domain Domain
PF00094 VWD 713 866 von Willebrand factor type D domain Family
PF08742 C8 911 980 C8 domain Domain
PF01826 TIL 984 1036 Trypsin Inhibitor like cysteine rich domain Domain
PF00094 VWD 1100 1258 von Willebrand factor type D domain Family
PF08742 C8 1300 1368 C8 domain Domain
PF01826 TIL 1372 1425 Trypsin Inhibitor like cysteine rich domain Domain
PF12714 TILa 1426 1480 TILa domain Domain
PF00094 VWD 1487 1639 von Willebrand factor type D domain Family
PF08742 C8 1690 1757 C8 domain Domain
PF00100 Zona_pellucida 1806 2057 Zona pellucida-like domain Family
Sequence
MNYSSFLRIWVSFIFALVQHQAQPRELMYPFWQNDTKTPKVDDGSSSEIKLAIPVFFFGV
PYRTVYVNNNGVVSFNVLVSQFTPESFPLTDGRAFVAPFWADVHNGIRGEIYYRETMEPA
ILKRATKDIRKYFKDMATFSATWVFIVTWEEVTFYGGSSTTPVNTFQAVLVSDGSYTFTL
FNYYEINWTTGTASGGDPLTGLGGVMAQAGFNGGNLTNFFSLPGSRTPEIVNIQETTNVN
VPGRWAFKVDG
KEIDPANGCTSRGQFLRRGEVFWDDLNCTVKCRCLDFNNEIYCQEASCS
PYEVCEPKGKFFYCSAVETSTCVVFGEPHYHTFDGFLFHFQGSCAYLLARQCLQTSSLPF
FSVEAKNEHRRGSAVSWVKELSVEVNGYKILIPKGSYGRVKVNDLVTSLPVTLDLGTVKI
YQSGISTAVETDFGLLVTFDGQHYASISVPGSYINSTCGLCGNYNKNPLDDFLRPDGR
PA
MSVLDLGESWRVYHADWKCDSGCVDNCTQCDAATEALYFGSDYCGFLNKTDGPLWECGTV
VDPTAFVHSCVYDLCSVRDNGTLLCQAIQAYALVCQALGIPIGDWRTQTGC
VSTVQCPSF
SHYSVCTSSCPDTCSDLTASRNCATPCTEGCECNQGFVLSTSQCVPLHKC
GCDFDGHYYT
MGEFFWATANCTVQCLCEEGGDVYCFNKTCGSGEVCAVEDGYQGCF
PKRETVCLLSQNQV
LHTFDGASYAFPSEFSYTLLKTCPERPEYLEIDINKKKPDAGPAWLRGLRILVADQEVKI
GGIGASEVKLNGQEVELPFFHPSGKLEIYRNKNSTTVESKGVVTVQYSDIGLLYIRLSTT
YFNCTGGLCGFYNANASDEFCLPNGK
CTDNLAVFLESWTTFEEICNGECGDLLKACNNDS
ELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARY
ASACKNADVEVGPWRTYDFC
PLECPENSHFEECITCTETCETLTLGPICVDSCSEGCQCD
EGYALLGSQCVTRSEC
GCNFEGHQLATNETFWVDLDCQIFCYCSGTDNRVHCETIPCKDD
EYCMEEGGLYYCQARTDASCIVSGYGHYLTFDGFPFDFQTSCPLILCTTGSRPSSDSFPK
FVVTAKNEDRDPSLALWVKQVDVTVFGYSIVIHRAYKHTVLVNSERLYLPLKLGQGKINI
FSFGFHVVVETDFGLKVVYDWKTFLSITVPRSMQNSTYGLCGRYNGNPDDDLEMPMGL
LA
SSVNEFGQSWVKRDTFCQVGCGDRCPSCAKVEGFSKVQQLCSLIPNQNAAFSKCHSKVNP
TFFYKNCLFDSCIDGGAVQTACSWLQNYASTCQTQGITVTGWRNYTSC
TVTCPPNSHYES
CVSVCQPRCAAIRLKSDCSHYCVEGCHCDAGYVLNGKSCILPHSC
GCYSDGKYYEPKQLF
WNSDCTRRCRCFRRNVIQCDPRQCKSDEECALRNGVRGCF
STKTSYCLAAGGGVFRTFDG
AFLRFPANCAFVLSTICQKLPDISFQLIINFDKWSAPNLTIISPVYFYINEEQILINDRN
TVKVNGTQVNVPFITGLATKIYSSEGFLVIDTSPDIQIYYNGFNVIKISISERLQNKVCG
LCGNFNGDLTDDYVTLRGK
PVVSSVVLAQSWKTNGMQKRPLAPSCNELQFSQYAAMCDNV
HIQKMQGDGYCLKLTDMKGFFQPCYGLLDPLPFYESCYLDGCYSHKKFQLCGSLAAYGEA
CRSFGILSTEWIEKENC
SGVVEDPCVGADCPNRTCELGNGRELCGCIEPPPYGNNSHDII
DAEVTCKAAQMEVSISKCKLFQLGFEREGVRINDRQCTGIEGEDFISFQINNTKGNCGNI
VQSNGTHIMYKNTLWIESANNTGNIITRDRTINVEFSCAYELDIKISLDSVVKPMLSVIN
LTVPTQEGSFITKMALYKNASYKHPYRQGEVVLTTRDVLYVGVFVVGADATHLILTLNKC
YATPTRDSNDKLRYFIIEGGCQNLKDNTIGIEENAVSLTCRFHVTVFKFIGDYDEVHLHC
AVSLCDSEKYSCKITCP
HNSRIATDYTKEPKEQIISVGPIRRKRLDWCEDNGGCEQICTS
RVDGPLCSCVTGTLQEDGKSCRASNSSMELQVWTLLLIMIQISLWHFVYKSGTTS
Sequence length 2155
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Post-translational modification: synthesis of GPI-anchored proteins
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Breast cancer Malignant neoplasm of breast rs587776547, rs1137887, rs137853007, rs587776650, rs80359351, rs80359714, rs121917783, rs104886456, rs121964878, rs80359874, rs80357868, rs80357508, rs387906843, rs80357569, rs80358158
View all (309 more)
Deafness Deafness, Autosomal Dominant 12, Deafness, Autosomal Recessive 21 rs267607135, rs387906219, rs387906220, rs387906221, rs387906222, rs606231120, rs267606855, rs121918370, rs137853185, rs137853186, rs137853187, rs137853188, rs587776522, rs587776523, rs200781822
View all (1019 more)
21520338, 21917145, 22718023, 9949200, 12746400, 20947814
Hearing loss Sensorineural Hearing Loss (disorder) rs267607135, rs267606855, rs779841884, rs267606854, rs28942097, rs121908073, rs121908076, rs74315289, rs121908144, rs111033313, rs74315437, rs121908348, rs121908349, rs121908350, rs397515359
View all (184 more)
Nonsyndromic deafness Nonsyndromic Deafness rs606231410, rs794729665, rs730880338, rs1566538321 15319541, 18022253, 21520338, 24363064, 25758224, 22718023, 11711860, 25719458, 26806019, 15995703, 28012541, 9949200, 11087000, 9590290, 12746400
View all (2 more)
Associations from Text Mining
Disease Name Relationship Type References
3 Hydroxy 3 Methylglutaryl CoA Lyase Deficiency Associate 37927186
COVID 19 Associate 34322810
Deafness Associate 22534022, 23226338, 23767834, 24586623, 24816743, 33976695, 34997062, 9150164
Deafness Stimulate 23936151
Deafness Autosomal Dominant 12 Associate 37927186
Deafness autosomal dominant nonsyndromic sensorineural 22 Associate 24586623
Deafness Autosomal Recessive 21 Associate 28012541
Genetic Diseases Inborn Associate 34795337
Hearing Loss Associate 10739769, 16718611, 19888295, 21520338, 23936151, 24586623, 25008054, 28012541, 29293505, 30935366, 31554319, 32682410, 32864763, 34753855, 37927186
View all (1 more)
Hearing Loss Conductive Associate 24378291