Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6850
Gene name Gene Name - the full gene name approved by the HGNC.
Spleen associated tyrosine kinase
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SYK
Synonyms (NCBI Gene) Gene synonyms aliases
IMD82, p72-Syk
Disease Acronyms (UniProt) Disease acronyms from UniProt database
IMD82
Chromosome Chromosome number
9
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
9q22.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the family of non-receptor type Tyr protein kinases. This protein is widely expressed in hematopoietic cells and is involved in coupling activated immunoreceptors to downstream signaling events that mediate diverse cellular r
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT043443 hsa-miR-331-3p CLASH 23622248
MIRT040474 hsa-miR-615-3p CLASH 23622248
MIRT038521 hsa-miR-99b-3p CLASH 23622248
MIRT709777 hsa-miR-4766-5p HITS-CLIP 19536157
MIRT709775 hsa-miR-3182 HITS-CLIP 19536157
Transcription factors
Transcription factor Regulation Reference
JUN Unknown 22354960
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0001525 Process Angiogenesis IEA
GO:0001784 Function Phosphotyrosine residue binding IMP 12051764
GO:0001784 Function Phosphotyrosine residue binding IPI 12051764, 20624904
GO:0001945 Process Lymph vessel development ISS
GO:0002092 Process Positive regulation of receptor internalization IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
600085 11491 ENSG00000165025
Protein
UniProt ID P43405
Protein name Tyrosine-protein kinase SYK (EC 2.7.10.2) (Spleen tyrosine kinase) (p72-Syk)
Protein function Non-receptor tyrosine kinase which mediates signal transduction downstream of a variety of transmembrane receptors including classical immunoreceptors like the B-cell receptor (BCR). Regulates several biological processes including innate and ad
PDB 1A81 , 1CSY , 1CSZ , 1XBA , 1XBB , 1XBC , 3BUW , 3EMG , 3FQE , 3FQH , 3FQS , 3SRV , 3TUB , 3TUC , 3TUD , 3VF8 , 3VF9 , 4DFL , 4DFN , 4F4P , 4FL1 , 4FL2 , 4FL3 , 4FYN , 4FYO , 4FZ6 , 4FZ7 , 4GFG , 4I0R , 4I0S , 4I0T , 4PUZ , 4PV0 , 4PX6 , 4RSS , 4RX7 , 4RX8 , 4RX9 , 4WNM , 4XG2 , 4XG3 , 4XG4 , 4XG6 , 4XG7 , 4XG8 , 4XG9 , 4YJO , 4YJP , 4YJQ , 4YJR , 4YJS
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00017 SH2 15 92 SH2 domain Domain
PF00017 SH2 168 244 SH2 domain Domain
PF07714 PK_Tyr_Ser-Thr 371 626 Protein tyrosine and serine/threonine kinase Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed in hematopoietic cells (at protein level) (PubMed:8163536). Expressed in neutrophils (at protein level) (PubMed:15123770). Within the B-cell compartment, expressed from pro- and pre-B cells to plasma cells (PubMed:8163
Sequence
Sequence length 635
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  NF-kappa B signaling pathway
Phospholipase D signaling pathway
PI3K-Akt signaling pathway
Osteoclast differentiation
Platelet activation
Neutrophil extracellular trap formation
C-type lectin receptor signaling pathway
Natural killer cell mediated cytotoxicity
B cell receptor signaling pathway
Fc epsilon RI signaling pathway
Fc gamma R-mediated phagocytosis
Tuberculosis
Kaposi sarcoma-associated herpesvirus infection
Herpes simplex virus 1 infection
Epstein-Barr virus infection
Coronavirus disease - COVID-19
Viral carcinogenesis
  GPVI-mediated activation cascade
FCGR activation
Regulation of actin dynamics for phagocytic cup formation
Role of phospholipids in phagocytosis
DAP12 signaling
Fc epsilon receptor (FCERI) signaling
Role of LAT2/NTAL/LAB on calcium mobilization
FCERI mediated MAPK activation
FCERI mediated Ca+2 mobilization
Integrin signaling
Dectin-2 family
Interleukin-2 signaling
Regulation of signaling by CBL
FCGR3A-mediated IL10 synthesis
FCGR3A-mediated phagocytosis
Antigen activates B Cell Receptor (BCR) leading to generation of second messengers
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Esophagus neoplasm Malignant neoplasm of esophagus rs28934578, rs121918714, rs1567556006, rs1575166666 21642993
Melanoma melanoma rs121913315, rs121913323, rs137853080, rs137853081, rs121909232, rs121913388, rs104894094, rs104894095, rs104894097, rs104894098, rs104894099, rs104894109, rs137854599, rs11547328, rs104894340
View all (64 more)
17145863
Mesothelioma Mesothelioma rs121907908, rs387906350, rs387906351 17659810
Unknown
Disease term Disease name Evidence References Source
Immunodeficiency immunodeficiency 82 with systemic inflammation GenCC
Diabetes Diabetes GWAS
Multiple Sclerosis Multiple Sclerosis GWAS
Atrial Fibrillation Atrial Fibrillation GWAS
Associations from Text Mining
Disease Name Relationship Type References
Acrocephalosyndactylia Stimulate 30898992
Adenocarcinoma of Lung Associate 27461624, 35868661
Anemia Sickle Cell Associate 11698299
Anti Neutrophil Cytoplasmic Antibody Associated Vasculitis Associate 36428281
Arthritis Rheumatoid Associate 16452391, 38350168
Asthma Associate 8590001
Atherosclerosis Associate 22321643, 28260035
Autoimmune Diseases Associate 25715120, 31616406, 37301715
Blood Platelet Disorders Associate 29297721, 33267658, 35309299
Breast Neoplasms Associate 11859072, 12477728, 17214368, 19435818, 20562096, 20628393, 22451900, 22864779, 23613720, 23684705, 23803121, 24523870, 24914616, 25092868, 26126114
View all (6 more)