Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene SNPs miRNA Gene ontology Other IDs Protein Pathways Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	6602
Gene name Gene Name - the full gene name approved by the HGNC.	SWI/SNF related BAF chromatin remodeling complex subunit D1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SMARCD1
Synonyms (NCBI Gene) Gene synonyms aliases	BAF60A, CRACD1, CSS11, Rsc6p
Chromosome Chromosome number	12
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	12q13.12
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a member of the SWI/SNF family of proteins, whose members display helicase and ATPase activities and which are thought to regulate transcription of certain genes by altering the chromatin structure around those genes. T

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SNP ID	Visualize variation	Clinical significance	Consequence
rs372368908	C>A,T	Pathogenic	Non coding transcript variant, stop gained, genic downstream transcript variant, synonymous variant, coding sequence variant
rs1592289150	C>G	Pathogenic	Downstream transcript variant, genic downstream transcript variant, non coding transcript variant, missense variant, coding sequence variant
rs1592294569	A>G	Pathogenic	Genic downstream transcript variant, intron variant, non coding transcript variant, missense variant, coding sequence variant
rs1592295890	G>A	Pathogenic	Genic downstream transcript variant, stop gained, coding sequence variant, non coding transcript variant
rs1592295914	T>C	Pathogenic	Genic downstream transcript variant, missense variant, coding sequence variant, non coding transcript variant

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miRTarBase ID	miRNA	Experiments	Reference
MIRT025886	hsa-miR-7-5p	Sequencing	20371350
MIRT025886	hsa-miR-7-5p	Microarray	17612493
MIRT027347	hsa-miR-101-3p	Sequencing	20371350
MIRT032437	hsa-let-7b-5p	Proteomics	18668040
MIRT052651	hsa-miR-223-3p	Microarray, qRT-PCR	23757351
MIRT032437	hsa-let-7b-5p	CLASH	23622248
MIRT051748	hsa-let-7c-5p	CLASH	23622248
MIRT051748	hsa-let-7c-5p	CLASH	23622248
MIRT039323	hsa-miR-425-5p	CLASH	23622248
MIRT037419	hsa-miR-744-5p	CLASH	23622248
MIRT054259	hsa-miR-490-3p	ChIP-seq, Luciferase reporter assay, Microarray, qRT-PCR, Western blot	25503559
MIRT054259	hsa-miR-490-3p	ChIP-seq, Luciferase reporter assay, Microarray, qRT-PCR, Western blot	25503559
MIRT025886	hsa-miR-7-5p	PAR-CLIP	20371350
MIRT054259	hsa-miR-490-3p	PAR-CLIP	20371350
MIRT273384	hsa-miR-8066	PAR-CLIP	20371350
MIRT273382	hsa-miR-619-3p	PAR-CLIP	20371350
MIRT273383	hsa-miR-3185	PAR-CLIP	20371350
MIRT467555	hsa-miR-3975	PAR-CLIP	20371350
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	20371350
MIRT467553	hsa-miR-485-5p	PAR-CLIP	20371350
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	20371350
MIRT467551	hsa-miR-3188	PAR-CLIP	20371350
MIRT467550	hsa-miR-6077	PAR-CLIP	20371350
MIRT467549	hsa-miR-4316	PAR-CLIP	20371350
MIRT467548	hsa-miR-1294	PAR-CLIP	20371350
MIRT025886	hsa-miR-7-5p	PAR-CLIP	20371350
MIRT054259	hsa-miR-490-3p	PAR-CLIP	20371350
MIRT273384	hsa-miR-8066	PAR-CLIP	20371350
MIRT273382	hsa-miR-619-3p	PAR-CLIP	20371350
MIRT273383	hsa-miR-3185	PAR-CLIP	20371350
MIRT467555	hsa-miR-3975	PAR-CLIP	20371350
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	20371350
MIRT467553	hsa-miR-485-5p	PAR-CLIP	20371350
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	20371350
MIRT467551	hsa-miR-3188	PAR-CLIP	20371350
MIRT467550	hsa-miR-6077	PAR-CLIP	20371350
MIRT467549	hsa-miR-4316	PAR-CLIP	20371350
MIRT467548	hsa-miR-1294	PAR-CLIP	20371350
MIRT467558	hsa-miR-6873-5p	PAR-CLIP	23592263
MIRT113314	hsa-miR-6808-5p	PAR-CLIP	23592263
MIRT113317	hsa-miR-6893-5p	PAR-CLIP	23592263
MIRT113301	hsa-miR-940	PAR-CLIP	23592263
MIRT467557	hsa-miR-9500	PAR-CLIP	23592263
MIRT467556	hsa-miR-4719	PAR-CLIP	23592263
MIRT025886	hsa-miR-7-5p	PAR-CLIP	23592263
MIRT054259	hsa-miR-490-3p	PAR-CLIP	23592263
MIRT273384	hsa-miR-8066	PAR-CLIP	23592263
MIRT273382	hsa-miR-619-3p	PAR-CLIP	23592263
MIRT273383	hsa-miR-3185	PAR-CLIP	23592263
MIRT467555	hsa-miR-3975	PAR-CLIP	23592263
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	23592263
MIRT467553	hsa-miR-485-5p	PAR-CLIP	23592263
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	23592263
MIRT467551	hsa-miR-3188	PAR-CLIP	23592263
MIRT467550	hsa-miR-6077	PAR-CLIP	23592263
MIRT467549	hsa-miR-4316	PAR-CLIP	23592263
MIRT467548	hsa-miR-1294	PAR-CLIP	23592263
MIRT467547	hsa-miR-4695-5p	PAR-CLIP	23592263
MIRT467546	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT467545	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT467544	hsa-miR-4459	PAR-CLIP	23592263
MIRT467543	hsa-miR-665	PAR-CLIP	23592263
MIRT467542	hsa-miR-6840-3p	PAR-CLIP	23592263
MIRT113304	hsa-miR-1827	PAR-CLIP	23592263
MIRT467541	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT467540	hsa-miR-4327	PAR-CLIP	23592263
MIRT467539	hsa-miR-3612	PAR-CLIP	23592263
MIRT467538	hsa-miR-650	PAR-CLIP	23592263
MIRT467537	hsa-miR-6807-5p	PAR-CLIP	23592263
MIRT467536	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT467535	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT025886	hsa-miR-7-5p	Luciferase reporter assay, qRT-PCR, Western blot	26542803
MIRT467548	hsa-miR-1294	PAR-CLIP	26701625
MIRT467548	hsa-miR-1294	PAR-CLIP	26701625
MIRT467548	hsa-miR-1294	PAR-CLIP	26701625
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	26701625
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	26701625
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	26701625
MIRT273383	hsa-miR-3185	PAR-CLIP	26701625
MIRT273383	hsa-miR-3185	PAR-CLIP	26701625
MIRT273383	hsa-miR-3185	PAR-CLIP	26701625
MIRT467551	hsa-miR-3188	PAR-CLIP	26701625
MIRT467551	hsa-miR-3188	PAR-CLIP	26701625
MIRT467551	hsa-miR-3188	PAR-CLIP	26701625
MIRT467555	hsa-miR-3975	PAR-CLIP	26701625
MIRT467555	hsa-miR-3975	PAR-CLIP	26701625
MIRT467555	hsa-miR-3975	PAR-CLIP	26701625
MIRT467549	hsa-miR-4316	PAR-CLIP	26701625
MIRT467549	hsa-miR-4316	PAR-CLIP	26701625
MIRT467549	hsa-miR-4316	PAR-CLIP	26701625
MIRT467553	hsa-miR-485-5p	PAR-CLIP	26701625
MIRT467553	hsa-miR-485-5p	PAR-CLIP	26701625
MIRT467553	hsa-miR-485-5p	PAR-CLIP	26701625
MIRT054259	hsa-miR-490-3p	PAR-CLIP	26701625
MIRT054259	hsa-miR-490-3p	PAR-CLIP	26701625
MIRT054259	hsa-miR-490-3p	PAR-CLIP	26701625
MIRT467550	hsa-miR-6077	PAR-CLIP	26701625
MIRT467550	hsa-miR-6077	PAR-CLIP	26701625
MIRT467550	hsa-miR-6077	PAR-CLIP	26701625
MIRT273382	hsa-miR-619-3p	PAR-CLIP	26701625
MIRT273382	hsa-miR-619-3p	PAR-CLIP	26701625
MIRT273382	hsa-miR-619-3p	PAR-CLIP	26701625
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	26701625
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	26701625
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	26701625
MIRT025886	hsa-miR-7-5p	PAR-CLIP	26701625
MIRT025886	hsa-miR-7-5p	PAR-CLIP	26701625
MIRT025886	hsa-miR-7-5p	PAR-CLIP	26701625
MIRT025886	hsa-miR-7-5p	PAR-CLIP	26701625
MIRT273384	hsa-miR-8066	PAR-CLIP	26701625
MIRT273384	hsa-miR-8066	PAR-CLIP	26701625
MIRT273384	hsa-miR-8066	PAR-CLIP	26701625
MIRT735327	hsa-miR-100-5p	Microarray, qRT-PCR, ELISA	32299427
MIRT025886	hsa-miR-7-5p	PAR-CLIP	20371350
MIRT054259	hsa-miR-490-3p	PAR-CLIP	20371350
MIRT273384	hsa-miR-8066	PAR-CLIP	20371350
MIRT273382	hsa-miR-619-3p	PAR-CLIP	20371350
MIRT273383	hsa-miR-3185	PAR-CLIP	20371350
MIRT467555	hsa-miR-3975	PAR-CLIP	20371350
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	20371350
MIRT467553	hsa-miR-485-5p	PAR-CLIP	20371350
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	20371350
MIRT467551	hsa-miR-3188	PAR-CLIP	20371350
MIRT467550	hsa-miR-6077	PAR-CLIP	20371350
MIRT467549	hsa-miR-4316	PAR-CLIP	20371350
MIRT467548	hsa-miR-1294	PAR-CLIP	20371350
MIRT025886	hsa-miR-7-5p	PAR-CLIP	20371350
MIRT054259	hsa-miR-490-3p	PAR-CLIP	20371350
MIRT273384	hsa-miR-8066	PAR-CLIP	20371350
MIRT273382	hsa-miR-619-3p	PAR-CLIP	20371350
MIRT273383	hsa-miR-3185	PAR-CLIP	20371350
MIRT467555	hsa-miR-3975	PAR-CLIP	20371350
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	20371350
MIRT467553	hsa-miR-485-5p	PAR-CLIP	20371350
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	20371350
MIRT467551	hsa-miR-3188	PAR-CLIP	20371350
MIRT467550	hsa-miR-6077	PAR-CLIP	20371350
MIRT467549	hsa-miR-4316	PAR-CLIP	20371350
MIRT467548	hsa-miR-1294	PAR-CLIP	20371350
MIRT467558	hsa-miR-6873-5p	PAR-CLIP	23592263
MIRT113314	hsa-miR-6808-5p	PAR-CLIP	23592263
MIRT113317	hsa-miR-6893-5p	PAR-CLIP	23592263
MIRT113301	hsa-miR-940	PAR-CLIP	23592263
MIRT467557	hsa-miR-9500	PAR-CLIP	23592263
MIRT467556	hsa-miR-4719	PAR-CLIP	23592263
MIRT025886	hsa-miR-7-5p	PAR-CLIP	23592263
MIRT054259	hsa-miR-490-3p	PAR-CLIP	23592263
MIRT273384	hsa-miR-8066	PAR-CLIP	23592263
MIRT273382	hsa-miR-619-3p	PAR-CLIP	23592263
MIRT273383	hsa-miR-3185	PAR-CLIP	23592263
MIRT467555	hsa-miR-3975	PAR-CLIP	23592263
MIRT467554	hsa-miR-2467-5p	PAR-CLIP	23592263
MIRT467553	hsa-miR-485-5p	PAR-CLIP	23592263
MIRT467552	hsa-miR-6884-5p	PAR-CLIP	23592263
MIRT467551	hsa-miR-3188	PAR-CLIP	23592263
MIRT467550	hsa-miR-6077	PAR-CLIP	23592263
MIRT467549	hsa-miR-4316	PAR-CLIP	23592263
MIRT467548	hsa-miR-1294	PAR-CLIP	23592263
MIRT467547	hsa-miR-4695-5p	PAR-CLIP	23592263
MIRT467546	hsa-miR-1910-3p	PAR-CLIP	23592263
MIRT467545	hsa-miR-6511a-5p	PAR-CLIP	23592263
MIRT467544	hsa-miR-4459	PAR-CLIP	23592263
MIRT467543	hsa-miR-665	PAR-CLIP	23592263
MIRT467542	hsa-miR-6840-3p	PAR-CLIP	23592263
MIRT113304	hsa-miR-1827	PAR-CLIP	23592263
MIRT467541	hsa-miR-6499-3p	PAR-CLIP	23592263
MIRT467540	hsa-miR-4327	PAR-CLIP	23592263
MIRT467539	hsa-miR-3612	PAR-CLIP	23592263
MIRT467538	hsa-miR-650	PAR-CLIP	23592263
MIRT467537	hsa-miR-6807-5p	PAR-CLIP	23592263
MIRT467536	hsa-miR-455-3p	PAR-CLIP	23592263
MIRT467535	hsa-miR-6516-5p	PAR-CLIP	23592263
MIRT1371848	hsa-miR-1237	CLIP-seq
MIRT1371849	hsa-miR-1248	CLIP-seq
MIRT1371850	hsa-miR-1292	CLIP-seq
MIRT1371851	hsa-miR-1321	CLIP-seq
MIRT1371852	hsa-miR-142-3p	CLIP-seq
MIRT1371853	hsa-miR-1912	CLIP-seq
MIRT1371854	hsa-miR-1972	CLIP-seq
MIRT1371855	hsa-miR-21	CLIP-seq
MIRT1371856	hsa-miR-214	CLIP-seq
MIRT1371857	hsa-miR-221	CLIP-seq
MIRT1371858	hsa-miR-222	CLIP-seq
MIRT1371859	hsa-miR-2277-3p	CLIP-seq
MIRT1371860	hsa-miR-24	CLIP-seq
MIRT1371861	hsa-miR-3137	CLIP-seq
MIRT1371862	hsa-miR-3144-5p	CLIP-seq
MIRT1371863	hsa-miR-3151	CLIP-seq
MIRT1371864	hsa-miR-3191	CLIP-seq
MIRT1371865	hsa-miR-3199	CLIP-seq
MIRT1371866	hsa-miR-361-5p	CLIP-seq
MIRT1371867	hsa-miR-3619-5p	CLIP-seq
MIRT1371868	hsa-miR-3661	CLIP-seq
MIRT1371869	hsa-miR-3686	CLIP-seq
MIRT1371870	hsa-miR-371b-3p	CLIP-seq
MIRT1371871	hsa-miR-3976	CLIP-seq
MIRT1371872	hsa-miR-4265	CLIP-seq
MIRT1371873	hsa-miR-4269	CLIP-seq
MIRT1371874	hsa-miR-4283	CLIP-seq
MIRT1371875	hsa-miR-4296	CLIP-seq
MIRT1371876	hsa-miR-4322	CLIP-seq
MIRT1371877	hsa-miR-4433	CLIP-seq
MIRT1371878	hsa-miR-4437	CLIP-seq
MIRT1371879	hsa-miR-4438	CLIP-seq
MIRT1371880	hsa-miR-4446-3p	CLIP-seq
MIRT1371881	hsa-miR-4447	CLIP-seq
MIRT1371882	hsa-miR-4471	CLIP-seq
MIRT1371883	hsa-miR-4472	CLIP-seq
MIRT1371884	hsa-miR-4473	CLIP-seq
MIRT1371885	hsa-miR-4489	CLIP-seq
MIRT1371886	hsa-miR-4492	CLIP-seq
MIRT1371887	hsa-miR-4498	CLIP-seq
MIRT1371888	hsa-miR-4505	CLIP-seq
MIRT1371889	hsa-miR-4513	CLIP-seq
MIRT1371890	hsa-miR-4650-5p	CLIP-seq
MIRT1371891	hsa-miR-4652-3p	CLIP-seq
MIRT1371892	hsa-miR-4652-5p	CLIP-seq
MIRT1371893	hsa-miR-4661-5p	CLIP-seq
MIRT1371894	hsa-miR-4667-5p	CLIP-seq
MIRT1371895	hsa-miR-4668-5p	CLIP-seq
MIRT1371896	hsa-miR-4690-5p	CLIP-seq
MIRT1371897	hsa-miR-4700-5p	CLIP-seq
MIRT1371898	hsa-miR-4714-3p	CLIP-seq
MIRT1371899	hsa-miR-4717-3p	CLIP-seq
MIRT1371900	hsa-miR-4721	CLIP-seq
MIRT1371901	hsa-miR-4728-5p	CLIP-seq
MIRT1371902	hsa-miR-4731-5p	CLIP-seq
MIRT1371903	hsa-miR-4739	CLIP-seq
MIRT1371904	hsa-miR-4740-5p	CLIP-seq
MIRT1371905	hsa-miR-4756-5p	CLIP-seq
MIRT1371906	hsa-miR-4768-3p	CLIP-seq
MIRT1371907	hsa-miR-486-3p	CLIP-seq
MIRT1371908	hsa-miR-491-5p	CLIP-seq
MIRT1371909	hsa-miR-498	CLIP-seq
MIRT1371910	hsa-miR-5095	CLIP-seq
MIRT1371911	hsa-miR-512-3p	CLIP-seq
MIRT1371912	hsa-miR-516a-3p	CLIP-seq
MIRT1371913	hsa-miR-520f	CLIP-seq
MIRT1371914	hsa-miR-548b-3p	CLIP-seq
MIRT1371915	hsa-miR-548v	CLIP-seq
MIRT1371916	hsa-miR-590-5p	CLIP-seq
MIRT1371917	hsa-miR-627	CLIP-seq
MIRT1371918	hsa-miR-631	CLIP-seq
MIRT1371919	hsa-miR-761	CLIP-seq
MIRT1371920	hsa-miR-762	CLIP-seq
MIRT1371921	hsa-miR-924	CLIP-seq
MIRT1371848	hsa-miR-1237	CLIP-seq
MIRT1371849	hsa-miR-1248	CLIP-seq
MIRT1371922	hsa-miR-128	CLIP-seq
MIRT1371850	hsa-miR-1292	CLIP-seq
MIRT1371923	hsa-miR-1296	CLIP-seq
MIRT1371851	hsa-miR-1321	CLIP-seq
MIRT1371924	hsa-miR-196a	CLIP-seq
MIRT1371925	hsa-miR-196b	CLIP-seq
MIRT1371855	hsa-miR-21	CLIP-seq
MIRT1371926	hsa-miR-27a	CLIP-seq
MIRT1371927	hsa-miR-27b	CLIP-seq
MIRT1371928	hsa-miR-2909	CLIP-seq
MIRT1371929	hsa-miR-3126-5p	CLIP-seq
MIRT1371930	hsa-miR-3200-5p	CLIP-seq
MIRT1371931	hsa-miR-342-3p	CLIP-seq
MIRT1371866	hsa-miR-361-5p	CLIP-seq
MIRT1371870	hsa-miR-371b-3p	CLIP-seq
MIRT1371932	hsa-miR-3927	CLIP-seq
MIRT1371871	hsa-miR-3976	CLIP-seq
MIRT1371872	hsa-miR-4265	CLIP-seq
MIRT1371933	hsa-miR-4266	CLIP-seq
MIRT1371873	hsa-miR-4269	CLIP-seq
MIRT1371875	hsa-miR-4296	CLIP-seq
MIRT1371934	hsa-miR-4320	CLIP-seq
MIRT1371876	hsa-miR-4322	CLIP-seq
MIRT1371935	hsa-miR-4419a	CLIP-seq
MIRT1371877	hsa-miR-4433	CLIP-seq
MIRT1371936	hsa-miR-4436b-3p	CLIP-seq
MIRT1371879	hsa-miR-4438	CLIP-seq
MIRT1371882	hsa-miR-4471	CLIP-seq
MIRT1371937	hsa-miR-4510	CLIP-seq
MIRT1371938	hsa-miR-4649-3p	CLIP-seq
MIRT1371890	hsa-miR-4650-5p	CLIP-seq
MIRT1371891	hsa-miR-4652-3p	CLIP-seq
MIRT1371893	hsa-miR-4661-5p	CLIP-seq
MIRT1371895	hsa-miR-4668-5p	CLIP-seq
MIRT1371939	hsa-miR-4691-3p	CLIP-seq
MIRT1371898	hsa-miR-4714-3p	CLIP-seq
MIRT1371899	hsa-miR-4717-3p	CLIP-seq
MIRT1371901	hsa-miR-4728-5p	CLIP-seq
MIRT1371903	hsa-miR-4739	CLIP-seq
MIRT1371905	hsa-miR-4756-5p	CLIP-seq
MIRT1371940	hsa-miR-4761-3p	CLIP-seq
MIRT1371906	hsa-miR-4768-3p	CLIP-seq
MIRT1371941	hsa-miR-4778-5p	CLIP-seq
MIRT1371942	hsa-miR-4779	CLIP-seq
MIRT1371909	hsa-miR-498	CLIP-seq
MIRT1371910	hsa-miR-5095	CLIP-seq
MIRT1371912	hsa-miR-516a-3p	CLIP-seq
MIRT1371916	hsa-miR-590-5p	CLIP-seq
MIRT2110339	hsa-miR-1252	CLIP-seq
MIRT1371936	hsa-miR-4436b-3p	CLIP-seq
MIRT2110340	hsa-miR-4475	CLIP-seq
MIRT2110341	hsa-miR-4533	CLIP-seq
MIRT2110342	hsa-miR-1207-3p	CLIP-seq
MIRT2110343	hsa-miR-1207-5p	CLIP-seq
MIRT2110344	hsa-miR-122	CLIP-seq
MIRT2110345	hsa-miR-1245b-3p	CLIP-seq
MIRT2110339	hsa-miR-1252	CLIP-seq
MIRT2110346	hsa-miR-1278	CLIP-seq
MIRT1371850	hsa-miR-1292	CLIP-seq
MIRT2110347	hsa-miR-1295	CLIP-seq
MIRT1371851	hsa-miR-1321	CLIP-seq
MIRT2110348	hsa-miR-1323	CLIP-seq
MIRT2110349	hsa-miR-136	CLIP-seq
MIRT2110350	hsa-miR-1825	CLIP-seq
MIRT2110351	hsa-miR-186	CLIP-seq
MIRT2110352	hsa-miR-1913	CLIP-seq
MIRT2110353	hsa-miR-1915	CLIP-seq
MIRT2110354	hsa-miR-198	CLIP-seq
MIRT2110355	hsa-miR-199a-5p	CLIP-seq
MIRT2110356	hsa-miR-199b-5p	CLIP-seq
MIRT2110357	hsa-miR-200b	CLIP-seq
MIRT2110358	hsa-miR-200c	CLIP-seq
MIRT1371856	hsa-miR-214	CLIP-seq
MIRT2110359	hsa-miR-22	CLIP-seq
MIRT2110360	hsa-miR-2355-3p	CLIP-seq
MIRT2110361	hsa-miR-2355-5p	CLIP-seq
MIRT1371860	hsa-miR-24	CLIP-seq
MIRT2110362	hsa-miR-3128	CLIP-seq
MIRT2110363	hsa-miR-3133	CLIP-seq
MIRT2110364	hsa-miR-3136-3p	CLIP-seq
MIRT2110365	hsa-miR-3138	CLIP-seq
MIRT2110366	hsa-miR-3145-5p	CLIP-seq
MIRT2110367	hsa-miR-3173-3p	CLIP-seq
MIRT2110368	hsa-miR-3189-5p	CLIP-seq
MIRT2110369	hsa-miR-323b-3p	CLIP-seq
MIRT2110370	hsa-miR-323b-5p	CLIP-seq
MIRT2110371	hsa-miR-324-3p	CLIP-seq
MIRT1371867	hsa-miR-3619-5p	CLIP-seq
MIRT2110372	hsa-miR-3668	CLIP-seq
MIRT2110373	hsa-miR-3942-5p	CLIP-seq
MIRT2110374	hsa-miR-3978	CLIP-seq
MIRT1371872	hsa-miR-4265	CLIP-seq
MIRT1371873	hsa-miR-4269	CLIP-seq
MIRT2110375	hsa-miR-4270	CLIP-seq
MIRT2110376	hsa-miR-429	CLIP-seq
MIRT1371875	hsa-miR-4296	CLIP-seq
MIRT2110377	hsa-miR-4308	CLIP-seq
MIRT1371876	hsa-miR-4322	CLIP-seq
MIRT1371935	hsa-miR-4419a	CLIP-seq
MIRT2110378	hsa-miR-4428	CLIP-seq
MIRT1371936	hsa-miR-4436b-3p	CLIP-seq
MIRT1371879	hsa-miR-4438	CLIP-seq
MIRT2110379	hsa-miR-4441	CLIP-seq
MIRT1371882	hsa-miR-4471	CLIP-seq
MIRT2110340	hsa-miR-4475	CLIP-seq
MIRT2110380	hsa-miR-4477a	CLIP-seq
MIRT2110381	hsa-miR-4491	CLIP-seq
MIRT1371937	hsa-miR-4510	CLIP-seq
MIRT2110382	hsa-miR-451b	CLIP-seq
MIRT2110383	hsa-miR-4521	CLIP-seq
MIRT2110341	hsa-miR-4533	CLIP-seq
MIRT2110384	hsa-miR-4645-3p	CLIP-seq
MIRT2110385	hsa-miR-4651	CLIP-seq
MIRT2110386	hsa-miR-4657	CLIP-seq
MIRT2110387	hsa-miR-4685-5p	CLIP-seq
MIRT1371939	hsa-miR-4691-3p	CLIP-seq
MIRT2110388	hsa-miR-4699-5p	CLIP-seq
MIRT2110389	hsa-miR-4703-5p	CLIP-seq
MIRT1371899	hsa-miR-4717-3p	CLIP-seq
MIRT1371901	hsa-miR-4728-5p	CLIP-seq
MIRT1371903	hsa-miR-4739	CLIP-seq
MIRT2110390	hsa-miR-4747-3p	CLIP-seq
MIRT2110391	hsa-miR-4747-5p	CLIP-seq
MIRT1371905	hsa-miR-4756-5p	CLIP-seq
MIRT2110392	hsa-miR-4758-3p	CLIP-seq
MIRT2110393	hsa-miR-4763-3p	CLIP-seq
MIRT2110394	hsa-miR-4800-5p	CLIP-seq
MIRT1371908	hsa-miR-491-5p	CLIP-seq
MIRT2110395	hsa-miR-505	CLIP-seq
MIRT1371910	hsa-miR-5095	CLIP-seq
MIRT2110396	hsa-miR-515-5p	CLIP-seq
MIRT2110397	hsa-miR-518d-5p	CLIP-seq
MIRT2110398	hsa-miR-519b-5p	CLIP-seq
MIRT2110399	hsa-miR-519c-5p	CLIP-seq
MIRT2110400	hsa-miR-520c-5p	CLIP-seq
MIRT2110401	hsa-miR-526a	CLIP-seq
MIRT2110402	hsa-miR-544b	CLIP-seq
MIRT2110403	hsa-miR-548a-3p	CLIP-seq
MIRT2110404	hsa-miR-548e	CLIP-seq
MIRT2110405	hsa-miR-548f	CLIP-seq
MIRT2110406	hsa-miR-548o	CLIP-seq
MIRT2110407	hsa-miR-555	CLIP-seq
MIRT2110408	hsa-miR-608	CLIP-seq
MIRT2110409	hsa-miR-619	CLIP-seq
MIRT2110410	hsa-miR-659	CLIP-seq
MIRT2110411	hsa-miR-676	CLIP-seq
MIRT2110412	hsa-miR-7	CLIP-seq
MIRT2110413	hsa-miR-711	CLIP-seq
MIRT1371919	hsa-miR-761	CLIP-seq
MIRT2110414	hsa-miR-875-3p	CLIP-seq
MIRT2110415	hsa-miR-885-5p	CLIP-seq
MIRT2110343	hsa-miR-1207-5p	CLIP-seq
MIRT2110339	hsa-miR-1252	CLIP-seq
MIRT2333921	hsa-miR-127-5p	CLIP-seq
MIRT2333922	hsa-miR-1304	CLIP-seq
MIRT1371851	hsa-miR-1321	CLIP-seq
MIRT2333923	hsa-miR-1909	CLIP-seq
MIRT2110353	hsa-miR-1915	CLIP-seq
MIRT2110363	hsa-miR-3133	CLIP-seq
MIRT2110364	hsa-miR-3136-3p	CLIP-seq
MIRT2333924	hsa-miR-3150a-3p	CLIP-seq
MIRT2333925	hsa-miR-3616-3p	CLIP-seq
MIRT2110375	hsa-miR-4270	CLIP-seq
MIRT1371936	hsa-miR-4436b-3p	CLIP-seq
MIRT2110379	hsa-miR-4441	CLIP-seq
MIRT1371886	hsa-miR-4492	CLIP-seq
MIRT1371887	hsa-miR-4498	CLIP-seq
MIRT1371888	hsa-miR-4505	CLIP-seq
MIRT2110341	hsa-miR-4533	CLIP-seq
MIRT1371894	hsa-miR-4667-5p	CLIP-seq
MIRT2110387	hsa-miR-4685-5p	CLIP-seq
MIRT1371897	hsa-miR-4700-5p	CLIP-seq
MIRT1371900	hsa-miR-4721	CLIP-seq
MIRT1371901	hsa-miR-4728-5p	CLIP-seq
MIRT1371902	hsa-miR-4731-5p	CLIP-seq
MIRT1371903	hsa-miR-4739	CLIP-seq
MIRT1371905	hsa-miR-4756-5p	CLIP-seq
MIRT2110393	hsa-miR-4763-3p	CLIP-seq
MIRT2333926	hsa-miR-512-5p	CLIP-seq
MIRT2110402	hsa-miR-544b	CLIP-seq
MIRT1371917	hsa-miR-627	CLIP-seq
MIRT2110412	hsa-miR-7	CLIP-seq
MIRT1371920	hsa-miR-762	CLIP-seq
MIRT1371921	hsa-miR-924	CLIP-seq
MIRT2333927	hsa-miR-935	CLIP-seq
MIRT2333928	hsa-miR-939	CLIP-seq
MIRT2110343	hsa-miR-1207-5p	CLIP-seq
MIRT2110340	hsa-miR-4475	CLIP-seq
MIRT1371900	hsa-miR-4721	CLIP-seq
MIRT2110393	hsa-miR-4763-3p	CLIP-seq
MIRT2110412	hsa-miR-7	CLIP-seq
MIRT2110384	hsa-miR-4645-3p	CLIP-seq
MIRT1371914	hsa-miR-548b-3p	CLIP-seq
MIRT1371914	hsa-miR-548b-3p	CLIP-seq

Show/Hide all(50)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000776	Component	Kinetochore	NAS	11078522
GO:0000785	Component	Chromatin	NAS	12192000, 29374058
GO:0003682	Function	Chromatin binding	IEA
GO:0003712	Function	Transcription coregulator activity	IBA
GO:0003713	Function	Transcription coactivator activity	NAS	8804307
GO:0005102	Function	Signaling receptor binding	IEA
GO:0005515	Function	Protein binding	IPI	12917342, 15985610, 16189514, 18303029, 21516116, 21988832, 24421395, 24434208, 24981860, 25416956, 31515488, 32296183, 32459350, 32814053, 33961781, 34591612, 35271311
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005654	Component	Nucleoplasm	IDA
GO:0005654	Component	Nucleoplasm	IEA
GO:0005654	Component	Nucleoplasm	TAS
GO:0006325	Process	Chromatin organization	IEA
GO:0006337	Process	Nucleosome disassembly	IDA	8895581
GO:0006337	Process	Nucleosome disassembly	IEA
GO:0006338	Process	Chromatin remodeling	IDA	11726552
GO:0006338	Process	Chromatin remodeling	IMP	12917342
GO:0006338	Process	Chromatin remodeling	NAS	10078207, 29374058
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0006357	Process	Regulation of transcription by RNA polymerase II	NAS	8804307, 11263494, 17340523, 17920018, 18809673, 29374058
GO:0007399	Process	Nervous system development	IEA
GO:0008284	Process	Positive regulation of cell population proliferation	NAS	29374058
GO:0016363	Component	Nuclear matrix	NAS	9128241
GO:0016514	Component	SWI/SNF complex	IBA
GO:0016514	Component	SWI/SNF complex	IDA	8804307, 11078522, 29374058
GO:0016514	Component	SWI/SNF complex	IEA
GO:0016514	Component	SWI/SNF complex	NAS	8804307
GO:0016586	Component	RSC-type complex	NAS	8804307
GO:0030071	Process	Regulation of mitotic metaphase/anaphase transition	NAS	23698369, 25066234
GO:0035060	Component	Brahma complex	NAS	8804307
GO:0045582	Process	Positive regulation of T cell differentiation	NAS	12110891
GO:0045596	Process	Negative regulation of cell differentiation	NAS	30510198
GO:0045597	Process	Positive regulation of cell differentiation	NAS	11790558
GO:0045663	Process	Positive regulation of myoblast differentiation	NAS	11175787, 15985610
GO:0045815	Process	Transcription initiation-coupled chromatin remodeling	IMP	12917342
GO:0045893	Process	Positive regulation of DNA-templated transcription	IEA
GO:0060090	Function	Molecular adaptor activity	IDA	12917342
GO:0070316	Process	Regulation of G0 to G1 transition	NAS	11790558
GO:0071398	Process	Cellular response to fatty acid	IEA
GO:0071564	Component	NpBAF complex	IEA
GO:0071564	Component	NpBAF complex	ISS
GO:0071564	Component	NpBAF complex	NAS	8804307
GO:0071565	Component	NBAF complex	IEA
GO:0071565	Component	NBAF complex	ISS
GO:0071565	Component	NBAF complex	NAS	17920018
GO:0140288	Component	GBAF complex	NAS	29374058
GO:1902459	Process	Positive regulation of stem cell population maintenance	NAS	19279220, 30510198
GO:2000045	Process	Regulation of G1/S transition of mitotic cell cycle	NAS	10778858
GO:2000781	Process	Positive regulation of double-strand break repair	NAS	16932743, 25066234
GO:2000819	Process	Regulation of nucleotide-excision repair	NAS	12215535

MIM	HGNC	e!Ensembl
601735	11106	ENSG00000066117

Protein

UniProt ID

Q96GM5

Protein name

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 (60 kDa BRG-1/Brm-associated factor subunit A) (BRG1-associated factor 60A) (BAF60A) (SWI/SNF complex 60 kDa subunit)

Protein function

Involved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology). Component of SWI/SNF chromatin remodeling complexes that carry out key enzymatic activities, changing chromati

PDB

6LTH , 6LTJ , 7VDV , 7Y8R

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF02201	SWIB	293 → 365	SWIB/MDM2 domain	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed in all tissues tested, including brain, heart, kidney, liver, lung, muscle, pancreas and placenta. {ECO:0000269|PubMed:8804307}.

Sequence

MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT

Sequence length

515

Interactions

View interactions

	KEGG		Reactome
	ATP-dependent chromatin remodeling Thermogenesis Hepatocellular carcinoma		RMTs methylate histone arginines RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known

Show/Hide Causal Diseases (1)

Disease merge term	Disease name	dbSNP ID	References
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Coffin-Siris Syndrome	Coffin-Siris syndrome 11	rs1592289150, rs1592294569, rs1592295890, rs1592295914, rs372368908	N/A

Show/Hide Text Mining Associations (17)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Achalasia Addisonianism Alacrimia syndrome	Associate	9693044
Adenocarcinoma of Lung	Inhibit	26542803
Alcoholism	Associate	28981154
Anemia Aplastic	Associate	29596882
Aortic Aneurysm Abdominal	Associate	35968497
Asthma	Associate	31992292
Carcinoma Hepatocellular	Associate	38303608
Carcinoma Non Small Cell Lung	Inhibit	26542803
DNA Virus Infections	Associate	34898277
Endometriosis	Associate	32299427
Lung Neoplasms	Associate	26542803
Lymphoma Large B Cell Diffuse	Inhibit	29936139
Mesothelioma	Associate	38303608
Myelodysplastic Syndromes	Associate	29596882
Neoplasms	Associate	22722201, 35148461, 9693044
Prostatic Neoplasms	Associate	33323379
Urinary Bladder Neoplasms	Associate	35148461

SMARCD1 (SWI/SNF related BAF chromatin remodeling complex subunit D1)