Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6528
Gene name Gene Name - the full gene name approved by the HGNC.
Solute carrier family 5 member 5
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
SLC5A5
Synonyms (NCBI Gene) Gene synonyms aliases
NIS, TDH1
Chromosome Chromosome number
19
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
19p13.11
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the sodium glucose cotransporter family. The encoded protein is responsible for the uptake of iodine in tissues such as the thyroid and lactating breast tissue. The iodine taken up by the thyroid is incorporated into the meta
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs121909174 A>C Pathogenic Coding sequence variant, missense variant
rs121909175 C>A Pathogenic Coding sequence variant, stop gained
rs121909176 C>G Pathogenic Coding sequence variant, missense variant
rs121909177 C>G,T Pathogenic Synonymous variant, coding sequence variant, stop gained
rs121909178 G>A,C Pathogenic Coding sequence variant, genic upstream transcript variant, missense variant, upstream transcript variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT032088 hsa-let-7f-5p qRT-PCR 19956384
MIRT686052 hsa-miR-548c-3p HITS-CLIP 23313552
MIRT686051 hsa-miR-6732-3p HITS-CLIP 23313552
MIRT686050 hsa-miR-10a-5p HITS-CLIP 23313552
MIRT686049 hsa-miR-10b-5p HITS-CLIP 23313552
Transcription factors
Transcription factor Regulation Reference
APEX1 Activation 14630715
CREM Activation 18202121
CREM Repression 22510021
HHEX Activation 16854221
PAX8 Activation 14630715;17614769
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 32296183
GO:0005634 Component Nucleus IDA 15961562
GO:0005737 Component Cytoplasm IDA 18372236
GO:0005737 Component Cytoplasm IEA
GO:0005886 Component Plasma membrane IC 21988488, 26831514
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
601843 11040 ENSG00000105641
Protein
UniProt ID Q92911
Protein name Sodium/iodide cotransporter (Na(+)/I(-) cotransporter) (Natrium iodide transporter) (Sodium-iodide symporter) (Na(+)/I(-) symporter) (Solute carrier family 5 member 5)
Protein function Sodium:iodide symporter that mediates the transport of iodide into the thyroid gland (PubMed:12488351, PubMed:18372236, PubMed:18708479, PubMed:20797386, PubMed:31310151, PubMed:32084174, PubMed:8806637, PubMed:9329364). Can also mediate the tra
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00474 SSF 47 452 Sodium:solute symporter family Family
Tissue specificity TISSUE SPECIFICITY: Expression is primarily in thyroid tissue, but also to a lower extent in mammary gland and ovary. Expression is reduced in tumors. {ECO:0000269|PubMed:8806637, ECO:0000269|PubMed:9329364}.
Sequence
Sequence length 643
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Thyroid hormone synthesis   Thyroxine biosynthesis
Organic anion transporters
Defective SLC5A5 causes thyroid dyshormonogenesis 1 (TDH1)
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Associated diseases Disease associations categorized as Causal (pathogenic variants), Unknown (uncertain genetic evidence), or Text Mining (literature-based associations)
Causal Diseases caused by PATHOGENIC or LIKELY PATHOGENIC variants from ClinVar only
Disease merge term Disease name dbSNP ID References
Congenital Hypothyroidism congenital hypothyroidism rs121909180 N/A
Associations from Text Mining Disease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma Associate 36689061
Adenocarcinoma Follicular Associate 10907960
Ataxia Telangiectasia Associate 28957796
Barrett Esophagus Associate 17214887
Breast Neoplasms Associate 15001685, 16439463, 17332617, 17651485, 18500672, 23342072, 23404856, 23471296, 24114667, 24604910, 27061531
Carcinogenesis Associate 27061531
Carcinogenesis Inhibit 36585857
Carcinoma Hepatocellular Associate 21245850, 22359623, 23919394, 24052075, 30880979, 35778503
Carcinoma Non Small Cell Lung Associate 11571539
Carcinoma Papillary Stimulate 9525971