Entrez ID
Entrez Gene ID - the GENE ID in NCBI Gene database.
|
6521
|
Gene name
Gene Name - the full gene name approved by the HGNC.
|
Solute carrier family 4 member 1 (Diego blood group) |
Gene symbol
Gene Symbol - the official gene symbol approved by the HGNC.
|
SLC4A1 |
Synonyms (NCBI Gene)
Gene synonyms aliases
|
AE1, BND3, CD233, CHC, DI, EMPB3, EPB3, FR, RTA1A, SAO, SPH4, SW, WD, WD1, WR |
Disease Acronyms (UniProt)
Disease acronyms from UniProt database
|
CHC, SAO, SPH4, WD |
Chromosome
Chromosome number
|
17 |
Chromosome location
Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
|
17q21.31 |
Summary
Summary of gene provided in NCBI Entrez Gene.
|
The protein encoded by this gene is part of the anion exchanger (AE) family and is expressed in the erythrocyte plasma membrane, where it functions as a chloride/bicarbonate exchanger involved in carbon dioxide transport from tissues to lungs. The protein |
SNP ID |
Visualize variation |
Clinical significance |
Consequence |
rs5036 |
T>C |
Pathogenic, benign, likely-benign |
Coding sequence variant, missense variant, 5 prime UTR variant |
rs2285644 |
G>A,T |
Pathogenic, benign, likely-benign |
Coding sequence variant, genic downstream transcript variant, downstream transcript variant, missense variant |
rs13306787 |
C>A,T |
Pathogenic, uncertain-significance |
Stop gained, missense variant, coding sequence variant |
rs28929480 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs28931583 |
G>A,C,T |
Pathogenic |
Missense variant, coding sequence variant |
rs28931584 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs28931585 |
G>A,T |
Pathogenic |
Genic downstream transcript variant, downstream transcript variant, coding sequence variant, synonymous variant, missense variant |
rs45562031 |
C>T |
Likely-pathogenic, likely-benign, uncertain-significance |
5 prime UTR variant, missense variant, coding sequence variant |
rs56361140 |
G>A,C,T |
Pathogenic |
Stop gained, missense variant, coding sequence variant, synonymous variant |
rs75731670 |
C>G,T |
Affects |
Missense variant, coding sequence variant |
rs121912741 |
C>T |
Pathogenic |
3 prime UTR variant, coding sequence variant, missense variant |
rs121912742 |
G>A |
Pathogenic |
Coding sequence variant, stop gained |
rs121912743 |
C>G,T |
Affects |
Coding sequence variant, missense variant |
rs121912744 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs121912745 |
G>A,T |
Pathogenic |
Coding sequence variant, missense variant |
rs121912746 |
G>A |
Pathogenic |
Coding sequence variant, intron variant, missense variant |
rs121912748 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs121912749 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs121912750 |
T>C |
Pathogenic |
Missense variant, coding sequence variant, downstream transcript variant, genic downstream transcript variant |
rs121912751 |
G>T |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant, downstream transcript variant, genic downstream transcript variant |
rs121912752 |
ACC>- |
Pathogenic |
Coding sequence variant, downstream transcript variant, inframe deletion, genic downstream transcript variant |
rs121912753 |
A>G |
Pathogenic |
3 prime UTR variant, coding sequence variant, missense variant |
rs121912754 |
C>G,T |
Pathogenic |
Coding sequence variant, intron variant, missense variant |
rs121912755 |
C>T |
Pathogenic |
Coding sequence variant, missense variant |
rs121912756 |
C>T |
Affects |
Coding sequence variant, missense variant |
rs121912757 |
C>T |
Pathogenic, uncertain-significance |
Coding sequence variant, missense variant |
rs121912758 |
G>A,T |
Pathogenic |
Coding sequence variant, synonymous variant, missense variant |
rs121912759 |
G>A |
Pathogenic, uncertain-significance |
Missense variant, coding sequence variant, downstream transcript variant, genic downstream transcript variant |
rs147390654 |
C>A,T |
Conflicting-interpretations-of-pathogenicity, not-provided |
Missense variant, coding sequence variant |
rs373916826 |
G>A,T |
Pathogenic |
Synonymous variant, coding sequence variant, missense variant |
rs387906565 |
C>T |
Pathogenic |
Upstream transcript variant, genic upstream transcript variant, 5 prime UTR variant |
rs387906566 |
->CATCTGGGTG |
Pathogenic |
Genic downstream transcript variant, downstream transcript variant, coding sequence variant, frameshift variant |
rs750930293 |
G>A,T |
Pathogenic |
Coding sequence variant, stop gained, synonymous variant |
rs769664228 |
GGCAGCCAGGACCTGGGGGCTGAATGC>- |
Pathogenic, protective |
Inframe deletion, coding sequence variant |
rs772264078 |
G>T |
Likely-pathogenic |
Intron variant |
rs863225461 |
A>G |
Pathogenic |
Missense variant, coding sequence variant |
rs863225462 |
T>C |
Pathogenic |
Missense variant, coding sequence variant |
rs863225463 |
A>G |
Pathogenic |
Missense variant, coding sequence variant |
rs866727908 |
C>T |
Likely-pathogenic |
Missense variant, genic downstream transcript variant, coding sequence variant, downstream transcript variant |
rs878853002 |
C>T |
Pathogenic |
Missense variant, coding sequence variant, intron variant |
rs1057518222 |
TGTTGGGGGAG>- |
Pathogenic |
Frameshift variant, coding sequence variant |
rs1555596072 |
G>C |
Pathogenic |
Stop gained, coding sequence variant |
rs1555596165 |
A>C |
Likely-pathogenic |
Coding sequence variant, missense variant |
rs1555596483 |
C>T |
Pathogenic |
Splice donor variant |
rs1555596757 |
T>C |
Pathogenic |
Splice acceptor variant |
rs1567830555 |
C>T |
Likely-pathogenic |
Splice donor variant, intron variant |
rs1567834739 |
C>T |
Pathogenic |
Splice donor variant |
rs1598299485 |
C>T |
Pathogenic |
Missense variant, coding sequence variant |
rs1598301457 |
->C |
Pathogenic |
Frameshift variant, coding sequence variant |
rs1598302037 |
C>T |
Pathogenic |
Coding sequence variant, stop gained |
|
UniProt ID |
P02730
|
Protein name |
Band 3 anion transport protein (Anion exchange protein 1) (AE 1) (Anion exchanger 1) (Solute carrier family 4 member 1) (CD antigen CD233) |
Protein function |
Functions both as a transporter that mediates electroneutral anion exchange across the cell membrane and as a structural protein (PubMed:10926824, PubMed:14734552, PubMed:1538405, PubMed:16227998, PubMed:20151848, PubMed:24121512, PubMed:2838730 |
PDB |
1BH7
,
1BNX
,
1BTQ
,
1BTR
,
1BTS
,
1BTT
,
1BZK
,
1HYN
,
2BTA
,
2BTB
,
3BTB
,
4KY9
,
4YZF
,
7TVZ
,
7TW0
,
7TW1
,
7TW2
,
7TW3
,
7TW5
,
7TW6
,
7TY4
,
7TY6
,
7TY7
,
7TY8
,
7TYA
,
7UZ3
,
7UZU
,
7UZV
,
7V07
,
7V0K
,
7V0M
,
7V0T
,
7V0U
,
7V0Y
,
7V19
,
8CRQ
,
8CRR
,
8CRT
,
8CS9
,
8CSL
,
8CSV
,
8CSY
,
8CT3
,
8CTE
,
8T3R
,
8T3U
,
8T44
,
8T45
,
8T47
,
8T6U
,
8T6V
|
Family and domains |
Pfam
Accession |
ID |
Position in sequence |
Description |
Type |
PF07565
|
Band_3_cyto |
86 → 329 |
Band 3 cytoplasmic domain |
Domain |
PF00955
|
HCO3_cotransp |
372 → 566 |
HCO3- transporter family |
Family |
PF00955
|
HCO3_cotransp |
555 → 839 |
HCO3- transporter family |
Family |
|
Tissue specificity |
TISSUE SPECIFICITY: Detected in erythrocytes (at protein level). {ECO:0000269|PubMed:10926824, ECO:0000269|PubMed:1538405, ECO:0000269|PubMed:2204832, ECO:0000269|PubMed:23219802, ECO:0000269|PubMed:26542571, ECO:0000269|PubMed:7506871}.; TISSUE SPECIFICI |
Sequence |
|
Sequence length |
911 |
Interactions |
View interactions
|
Causal |
Disease term |
Disease name |
dbSNP ID |
References |
Anemia |
Anemia, Hemolytic, Anemia, Hemolytic, Acquired, Anemia, Microangiopathic, Anemia, hereditary spherocytic hemolytic, stomatocytic anemia |
rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966, rs137853122, rs137853123, rs786205060, rs267607121, rs121908584, rs80338697, rs80338699, rs120074166, rs120074167, rs1050828, rs74575103, rs137852314, rs5030868, rs137852316, rs137852317, rs137852318, rs137852319, rs137852320, rs137852321, rs137852322, rs137852323, rs137852324, rs72554665, rs387906468, rs5030872, rs137852326, rs137852333, rs137852327, rs137852328, rs137852329, rs137852330, rs137852331, rs137852332, rs137852334, rs137852335, rs137852336, rs137852339, rs76645461, rs137852340, rs137852341, rs78478128, rs137852343, rs137852344, rs137852345, rs587776730, rs137852346, rs137852347, rs137852349, rs2070404412, rs2070350038, rs2070350009, rs137852303, rs137852304, rs33946267, rs34378160, rs33933298, rs11549407, rs35724775, rs34598529, rs41469945, rs267607201, rs80338694, rs80338696, rs387907018, rs398123546, rs78365220, rs587777100, rs587777101, rs483352840, rs869312752, rs765487627, rs1557229599, rs1557230040, rs1555524842, rs782090947, rs1358275550, rs1557229736, rs1557230573, rs1556323334, rs1233124208, rs1293528130, rs146864395, rs1595503440, rs1603411214, rs137852325, rs1575247302, rs1603411177, rs1336651679, rs782322505 View all (89 more) |
16227998, 23664421 |
Cholelithiasis |
Cholelithiasis |
rs121918440, rs72552778, rs387906528, rs759202962, rs377160065, rs1051861187, rs757693457, rs752563752 |
|
Dehydrated hereditary stomatocytosis |
Dehydrated hereditary stomatocytosis |
rs774455945, rs1057519076, rs1057519077 |
|
Distal renal tubular acidosis |
Distal Renal Tubular Acidosis, Autosomal dominant distal renal tubular acidosis |
rs121964880, rs769664228, rs121912744, rs121912745, rs121912746, rs121912748, rs121912751, rs878853002, rs781838938, rs782152033, rs1443883930 |
9312167, 9600966, 23460825 |
Elliptocytosis |
Elliptocytosis, Hereditary, Elliptocytosis 4 |
rs121918645, rs863223302, rs863223303, rs1594753904, rs121918647, rs121918648, rs121918650, rs121918634, rs757679761, rs121918637, rs121918638, rs121918640, rs121918641, rs121918642, rs863223305, rs121434564 View all (1 more) |
9600966, 1737855, 23664421, 23339107 |
Hereditary spherocytosis |
Hereditary spherocytosis |
rs137852829, rs137852830, rs137852831, rs397514029, rs786205243, rs121918646, rs121918648, rs121918651, rs863223304, rs267607086, rs754614154, rs266257354, rs121917734, rs266257355, rs115998465, rs387906566, rs121912741, rs121912742, rs56361140, rs121912750, rs28931584, rs28931585, rs121912755, rs143682977, rs786204766, rs200386310, rs1553234309, rs1555366607, rs1555366592, rs1553232007, rs1554522035, rs777701149, rs1554567249, rs1554578304, rs1554627073, rs1555367359, rs1555367789, rs150471537, rs1555369657, rs1555370967, rs866727908, rs1555596072, rs1555596165, rs1555596757, rs1586144223, rs1563502820, rs1566754467, rs377659326, rs1594773586, rs1586072383, rs750820522, rs1586145051, rs1594767593, rs1586114714, rs1345709572 View all (40 more) |
23664421, 1378323 |
Hyperbilirubinemia |
Hyperbilirubinemia |
rs34993780, rs587784535, rs797046090, rs797046091 |
|
Hypofibrinogenemia |
Hypofibrinogenemia |
rs121913087, rs121913088, rs587776837, rs121909616, rs121909625, rs121909608, rs121909607, rs146387238, rs1578795296, rs1214070111, rs776817952, rs762964798, rs121909606, rs1414035000, rs1310452604 |
|
Pseudohyperkalemia cardiff |
Pseudohyperkalemia Cardiff |
rs754667801, rs764893806 |
16227998, 8547122, 1722314, 9600966 |
Renal tubular acidosis |
Renal Tubular Acidosis, Type II |
rs121908367, rs28939081, rs769664228, rs121912745, rs121912748, rs121912751, rs121912752, rs28931584, rs121912754, rs878853002, rs763982675, rs769164245, rs768446132, rs1443883930, rs754517968, rs1450564765, rs934266733, rs1584907924, rs753232747, rs1584934951 View all (5 more) |
9312167, 23460825 |
Renal tubular acidosis, with normal red cell morphology |
Renal Tubular Acidosis, Distal, With Normal Red Cell Morphology |
rs121912753 |
|
Restrictive cardiomyopathy |
Restrictive cardiomyopathy |
rs104894729, rs397516153, rs727503513, rs727503499, rs727503504, rs730880231, rs1554401403, rs1563005534, rs1420394583 |
|
Spherocytosis |
Spherocytosis, Type 4 |
rs786205242, rs786205243, rs786205244, rs121918634 |
9012689, 8547122, 10942416, 7530501, 16227998, 8640229, 15813913, 10580570, 11380459, 10745622, 9973643, 8943874, 9207478, 9600966, 1378323, 1722314, 9233560 View all (2 more) |
Thrombophilia |
Thrombophilia |
rs118203912, rs118203911, rs121918141, rs121918142, rs121918143, rs121918144, rs121918145, rs121918146, rs121918147, rs121918148, rs121918149, rs121918151, rs121918152, rs121918153, rs121918154, rs1558715857, rs121918155, rs121918157, rs121918158, rs2104934553, rs121918159, rs121918160, rs121918477, rs121918473, rs121918474, rs267606981, rs2107137679, rs121918475, rs387906674, rs387907201, rs369504169, rs142742242, rs373983977, rs368074804, rs574132670, rs757583846, rs863224838, rs121918476, rs1333329860, rs1553424043, rs1553808038, rs5017717, rs374476971, rs1553809314, rs1553423955, rs767112991, rs1558718572, rs571278160, rs766261022, rs1321566264, rs1559926604, rs1241365457, rs759677822, rs1448630830, rs1305782685, rs1571577365, rs1247269491, rs777486993, rs201907715, rs769277939, rs199469503, rs1575904540, rs199469494, rs199469471, rs1189377845, rs1576182848, rs1688218776, rs1456533664, rs1709033502, rs1708668246, rs1708665916 View all (56 more) |
|
|
Unknown |
Disease term |
Disease name |
Evidence |
References |
Source |
Hereditary Spherocytosis |
hereditary spherocytosis type 4 |
|
|
GenCC |
|
Associations from Text Mining |
Disease Name |
Relationship Type |
References |
Acidosis |
Associate
|
18266205, 29627839 |
Acidosis Renal Tubular |
Associate
|
10571775, 10926824, 12227829, 15252044, 18266205, 20799361, 24975934, 26542571, 26571219, 27493007, 27767102, 28188436, 28233610, 29573245, 29627839, 30230413, 31705302, 31959358, 32632909, 32758154, 34481427, 35612621, 36791635, 37775346, 38447554, 40428323, 9312167, 9497368, 9600966 View all (14 more) |
Acute Kidney Injury |
Associate
|
29627839 |
Adenocarcinoma Mucinous |
Associate
|
21699710 |
Adenoma |
Associate
|
17195820 |
alpha Thalassemia |
Associate
|
18266205 |
Anemia Hemolytic |
Associate
|
10926824, 18266205, 20799361, 36320073, 36791635 |
Anemia Hemolytic Congenital |
Associate
|
26542571 |
Anemia Sickle Cell |
Associate
|
18266205 |
beta Thalassemia |
Associate
|
40004059 |
Breast Neoplasms |
Associate
|
31556319 |
Carcinoma |
Associate
|
29609569 |
Carcinoma Hepatocellular |
Associate
|
34493740 |
Carcinoma Neuroendocrine |
Stimulate
|
34401980 |
Carcinoma Papillary |
Stimulate
|
20191116 |
Carcinoma Renal Cell |
Associate
|
24427344, 2456980, 34228212, 36510186 |
Carcinoma Signet Ring Cell |
Associate
|
36779496 |
Carcinoma Squamous Cell |
Associate
|
22749497 |
Cerebral Hemorrhage |
Associate
|
30836997 |
Chordoma |
Associate
|
18820665 |
Chromosome Aberrations |
Associate
|
32632909 |
Ciliopathies |
Associate
|
24257694 |
Colonic Neoplasms |
Associate
|
17971901 |
Colorectal Neoplasms |
Associate
|
17971901 |
Corneal dystrophy Avellino type |
Associate
|
21779668 |
Coronary Restenosis |
Associate
|
35144391 |
Coronavirus Infections |
Associate
|
10926824 |
Dykes Markes Harper syndrome |
Associate
|
18266205 |
Dyserythropoiesis Congenital with Internuclear Chromatin Bridges and Ultrastructurally Normal Erythroblast Heterochromatin |
Associate
|
36231035 |
Elliptocytosis Hereditary |
Associate
|
10571775, 11719395, 14695625, 15804238, 19391452, 28068080, 29043981, 32758154, 36320073, 36791635 |
Esophageal Squamous Cell Carcinoma |
Associate
|
28160546 |
Failure to Thrive |
Associate
|
29573245 |
Glycogen Storage Disease XII |
Associate
|
9497368 |
Glycosuria Renal |
Associate
|
34481427 |
Growth Disorders |
Associate
|
29573245, 29627839 |
Hemangioendothelioma Epithelioid |
Associate
|
26617819 |
Hemoglobinopathies |
Associate
|
18266205 |
Hemolysis |
Associate
|
18266205, 35321643, 36231035, 37280519 |
Hemorrhage |
Associate
|
36231035 |
Hereditary Breast and Ovarian Cancer Syndrome |
Associate
|
25044880 |
Hyperbilirubinemia |
Associate
|
34672909 |
Hypertension |
Associate
|
31033190 |
Iliotibial Band Syndrome |
Associate
|
25388786, 9012689, 9207478, 9326249 |
Keratosis Seborrheic |
Associate
|
22808299 |
Kidney Diseases |
Associate
|
27493007 |
Lupus Erythematosus Systemic |
Associate
|
39596553 |
Malaria |
Associate
|
14695625, 34014839, 35321643 |
Malaria Cerebral |
Associate
|
11719395 |
Meningeal Carcinomatosis |
Associate
|
22847723 |
Meningeal Carcinomatosis |
Stimulate
|
29540647 |
Mesothelioma |
Stimulate
|
25044880 |
Mesothelioma Malignant |
Associate
|
33493384 |
Musculoskeletal Diseases |
Associate
|
29573245 |
Nasopharyngeal Carcinoma |
Associate
|
6207735 |
Neoplasm Metastasis |
Associate
|
30290760 |
Neoplasms |
Associate
|
12296765, 15154010, 15811326, 16838056, 19337641, 20204716, 22850983, 25044880, 25178336, 25550837, 26315812, 27338635, 27568672, 28160546, 29042709, 29164474, 29609569, 30290760, 30424779, 30523510, 30534845, 30758756, 31228945, 31427558, 32327700, 33534223, 34401980, 34802045, 35125107, 35639915, 37058118, 37097347, 7517911 View all (18 more) |
Neoplasms Cystic Mucinous and Serous |
Stimulate
|
25044880 |
Neoplasms Squamous Cell |
Associate
|
30430416 |
Neoplastic Syndromes Hereditary |
Associate
|
34481427 |
Nephrocalcinosis |
Associate
|
35612621 |
Nephrolithiasis |
Associate
|
40428323 |
Neurilemmoma |
Associate
|
16357842 |
Neuroectodermal Tumors Primitive |
Associate
|
28296680 |
Neuroendocrine Tumors |
Associate
|
22180717 |
Neuroinflammatory Diseases |
Associate
|
30836997 |
Noncommunicable Diseases |
Associate
|
36254061 |
Pancreatitis |
Associate
|
20191116 |
Paraganglioma |
Stimulate
|
9771451 |
Penile Neoplasms |
Associate
|
30290760 |
Platelet Alpha Delta Storage Pool Deficiency |
Associate
|
36231035 |
Pleural Effusion Malignant |
Associate
|
25044880 |
Polycystic Ovary Syndrome |
Associate
|
33964924 |
Primary Myelofibrosis |
Associate
|
34238135, 34633991 |
Red Cell Aplasia Pure |
Associate
|
18266205 |
Red cell phospholipid defect with hemolysis |
Associate
|
32758154 |
Renal Insufficiency Chronic |
Associate
|
24257694 |
Renal tubular acidosis distal autosomal recessive |
Associate
|
15252044, 29573245, 36320073 |
Reticulocytosis |
Associate
|
18266205 |
Rickets |
Associate
|
29573245 |
Sarcoma Alveolar Soft Part |
Associate
|
24427344 |
Sarcoma Endometrial Stromal |
Associate
|
15309019 |
Sarcoma Synovial |
Associate
|
21959309 |
Small Cell Lung Carcinoma |
Associate
|
30793712 |
Solitary Fibrous Tumors |
Associate
|
34502329 |
Spherocytosis Hereditary |
Associate
|
11208088, 31122244, 31126250, 31602632, 32133777, 32436265, 33620149, 34481427, 34672909, 37280519, 37385619, 38069343, 8282779, 9012689, 9207478, 9266920, 9326249, 9401060 View all (3 more) |
Spherocytosis Type 1 |
Associate
|
25388786, 36231035 |
Spherocytosis Type 3 |
Associate
|
8704215 |
Stomatocytosis I |
Associate
|
23842529 |
Tertiary Lymphoid Structures |
Associate
|
15112272, 30290760 |
Uterine Neoplasms |
Associate
|
39201770 |
|