Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
6229
Gene name Gene Name - the full gene name approved by the HGNC.
Ribosomal protein S24
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
RPS24
Synonyms (NCBI Gene) Gene synonyms aliases
DBA3, S24, eS24
Disease Acronyms (UniProt) Disease acronyms from UniProt database
DBA3
Chromosome Chromosome number
10
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
10q22.3
Summary Summary of gene provided in NCBI Entrez Gene.
Ribosomes, the organelles that catalyze protein synthesis, consist of a small 40S subunit and a large 60S subunit. Together these subunits are composed of 4 RNA species and approximately 80 structurally distinct proteins. This gene encodes a ribosomal pro
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs104894188 C>T Pathogenic Stop gained, coding sequence variant
rs104894189 C>T Pathogenic Stop gained, coding sequence variant
rs116840806 AAC>TACGGATAG Pathogenic Inframe indel, stop gained, coding sequence variant
rs886039545 A>G Pathogenic Missense variant, initiator codon variant
rs1554841994 A>C Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT052586 hsa-let-7a-5p CLASH 23622248
MIRT052586 hsa-let-7a-5p CLASH 23622248
MIRT052260 hsa-let-7b-5p CLASH 23622248
MIRT052260 hsa-let-7b-5p CLASH 23622248
MIRT051855 hsa-let-7c-5p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000184 Process Nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
GO:0003723 Function RNA binding HDA 22658674, 22681889
GO:0003735 Function Structural constituent of ribosome HDA 15883184
GO:0003735 Function Structural constituent of ribosome IMP 18697920
GO:0003735 Function Structural constituent of ribosome NAS 18412286
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
602412 10411 ENSG00000138326
Protein
UniProt ID P62847
Protein name Small ribosomal subunit protein eS24 (40S ribosomal protein S24)
Protein function Component of the small ribosomal subunit (PubMed:23636399). The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell (PubMed:23636399). Required for processing of pre-rRNA and maturation of 40S ribo
PDB 4UG0 , 4V6X , 5A2Q , 5AJ0 , 5FLX , 5LKS , 5OA3 , 5T2C , 5VYC , 6FEC , 6G18 , 6G4S , 6G4W , 6G51 , 6G53 , 6G5H , 6G5I , 6IP5 , 6IP6 , 6IP8 , 6MTD , 6MTE , 6OLE , 6OLF , 6OLG , 6OLI , 6OLZ , 6OM0 , 6OM7 , 6QZP , 6XA1 , 6Y0G , 6Y2L , 6Y57 , 6YBW , 6Z6L , 6Z6M , 6Z6N , 6ZLW , 6ZM7 , 6ZME , 6ZMI , 6ZMO , 6ZMT , 6ZMW , 6ZN5 , 6ZOJ , 6ZOK , 6ZON , 6ZP4 , 6ZUO
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01282 Ribosomal_S24e 24 102 Ribosomal protein S24e Family
Tissue specificity TISSUE SPECIFICITY: Mature tissues, such as adult brain, skeletal muscle, heart, and kidney, express low levels, whereas tissues and organs with significant populations of proliferating cells, such as fetal brain, placenta, bone marrow, and various glandu
Sequence
MNDTVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGF
RTHFGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKT
SRKQRKERKNRMKKVRGT
AKANVGAGKKPKE
Sequence length 133
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Ribosome
Coronavirus disease - COVID-19
  L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Anemia Anemia, Macrocytic, Anemia, Diamond-Blackfan, Anemia, Diamond-Blackfan, 3 rs118204044, rs118204045, rs118204046, rs121918330, rs869320719, rs869312029, rs121918332, rs869320724, rs767094129, rs786205058, rs786205059, rs137853119, rs137853120, rs137853121, rs1384933966
View all (89 more)
23812780, 22939629, 19689926, 19773262, 17186470, 28297620, 25946618, 18230666
Leukemia Leukemia, Myelocytic, Acute, Acute leukemia rs121909646, rs121913488, rs587776834, rs752746786, rs869312821, rs767454740, rs1554564297 27903959
Migraine Migraine Disorders rs794727411
Unknown
Disease term Disease name Evidence References Source
Diamond-Blackfan anemia Diamond-Blackfan anemia 3 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Alzheimer Disease Associate 35766008
Anemia Diamond Blackfan Associate 17186470, 18535205, 19689926, 19765279, 19773262, 20116044, 22262766, 23812780, 24675553, 25946618, 31109297
Autism Spectrum Disorder Associate 25601189
Carcinoma Hepatocellular Associate 36614249
Congenital Hereditary and Neonatal Diseases and Abnormalities Associate 19773262
Hypoxia Associate 31911497
Hypoxia Brain Associate 38281767
Intervertebral Disc Degeneration Associate 31124977
Neoplasms Associate 36614249, 38281767
Osteoarthritis Associate 29344651