Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.	56731
Gene name Gene Name - the full gene name approved by the HGNC.	SLC2A4 regulator
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.	SLC2A4RG
Synonyms (NCBI Gene) Gene synonyms aliases	GEF, HDBP-1, HDBP1, Si-1-2, Si-1-2-19
Chromosome Chromosome number	20
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.	20q13.33
Summary Summary of gene provided in NCBI Entrez Gene.	The protein encoded by this gene is a nuclear transcription factor involved in the activation of the solute carrier family 2 member 4 gene. The encoded protein interacts with another transcription factor, myocyte enhancer factor 2, to activate transcripti

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miRTarBase ID	miRNA	Experiments	Reference
MIRT022491	hsa-miR-124-3p	Microarray	18668037
MIRT029272	hsa-miR-26b-5p	Microarray	19088304
MIRT037461	hsa-miR-744-5p	CLASH	23622248
MIRT037461	hsa-miR-744-5p	CLASH	23622248
MIRT500115	hsa-miR-1178-5p	PAR-CLIP	24398324
MIRT500113	hsa-miR-4690-3p	PAR-CLIP	24398324
MIRT500114	hsa-miR-5685	PAR-CLIP	24398324
MIRT500112	hsa-miR-6823-5p	PAR-CLIP	24398324
MIRT500111	hsa-miR-7108-3p	PAR-CLIP	24398324
MIRT500110	hsa-miR-3127-5p	PAR-CLIP	24398324
MIRT500115	hsa-miR-1178-5p	PAR-CLIP	26701625
MIRT500110	hsa-miR-3127-5p	PAR-CLIP	26701625
MIRT500113	hsa-miR-4690-3p	PAR-CLIP	26701625
MIRT500114	hsa-miR-5685	PAR-CLIP	26701625
MIRT500112	hsa-miR-6823-5p	PAR-CLIP	26701625
MIRT500111	hsa-miR-7108-3p	PAR-CLIP	26701625
MIRT500115	hsa-miR-1178-5p	PAR-CLIP	24398324
MIRT500113	hsa-miR-4690-3p	PAR-CLIP	24398324
MIRT500114	hsa-miR-5685	PAR-CLIP	24398324
MIRT500112	hsa-miR-6823-5p	PAR-CLIP	24398324
MIRT500111	hsa-miR-7108-3p	PAR-CLIP	24398324
MIRT500110	hsa-miR-3127-5p	PAR-CLIP	24398324
MIRT1358913	hsa-miR-106a	CLIP-seq
MIRT1358914	hsa-miR-106b	CLIP-seq
MIRT1358915	hsa-miR-1245b-3p	CLIP-seq
MIRT1358916	hsa-miR-1273g	CLIP-seq
MIRT1358917	hsa-miR-1275	CLIP-seq
MIRT1358918	hsa-miR-1289	CLIP-seq
MIRT1358919	hsa-miR-1303	CLIP-seq
MIRT1358920	hsa-miR-130a	CLIP-seq
MIRT1358921	hsa-miR-130b	CLIP-seq
MIRT1358922	hsa-miR-17	CLIP-seq
MIRT1358923	hsa-miR-1908	CLIP-seq
MIRT1358924	hsa-miR-1915	CLIP-seq
MIRT1358925	hsa-miR-193a-3p	CLIP-seq
MIRT1358926	hsa-miR-193b	CLIP-seq
MIRT1358927	hsa-miR-19a	CLIP-seq
MIRT1358928	hsa-miR-19b	CLIP-seq
MIRT1358929	hsa-miR-20a	CLIP-seq
MIRT1358930	hsa-miR-20b	CLIP-seq
MIRT1358931	hsa-miR-2277-3p	CLIP-seq
MIRT1358932	hsa-miR-301a	CLIP-seq
MIRT1358933	hsa-miR-301b	CLIP-seq
MIRT1358934	hsa-miR-302a	CLIP-seq
MIRT1358935	hsa-miR-302b	CLIP-seq
MIRT1358936	hsa-miR-302c	CLIP-seq
MIRT1358937	hsa-miR-302d	CLIP-seq
MIRT1358938	hsa-miR-302e	CLIP-seq
MIRT1358939	hsa-miR-3119	CLIP-seq
MIRT1358940	hsa-miR-3189-3p	CLIP-seq
MIRT1358941	hsa-miR-3199	CLIP-seq
MIRT1358942	hsa-miR-320a	CLIP-seq
MIRT1358943	hsa-miR-320b	CLIP-seq
MIRT1358944	hsa-miR-320c	CLIP-seq
MIRT1358945	hsa-miR-320d	CLIP-seq
MIRT1358946	hsa-miR-320e	CLIP-seq
MIRT1358947	hsa-miR-3591-5p	CLIP-seq
MIRT1358948	hsa-miR-361-3p	CLIP-seq
MIRT1358949	hsa-miR-3649	CLIP-seq
MIRT1358950	hsa-miR-3661	CLIP-seq
MIRT1358951	hsa-miR-3666	CLIP-seq
MIRT1358952	hsa-miR-3667-3p	CLIP-seq
MIRT1358953	hsa-miR-372	CLIP-seq
MIRT1358954	hsa-miR-373	CLIP-seq
MIRT1358955	hsa-miR-3918	CLIP-seq
MIRT1358956	hsa-miR-3936	CLIP-seq
MIRT1358957	hsa-miR-3973	CLIP-seq
MIRT1358958	hsa-miR-4260	CLIP-seq
MIRT1358959	hsa-miR-4283	CLIP-seq
MIRT1358960	hsa-miR-4295	CLIP-seq
MIRT1358961	hsa-miR-4323	CLIP-seq
MIRT1358962	hsa-miR-4330	CLIP-seq
MIRT1358963	hsa-miR-4424	CLIP-seq
MIRT1358964	hsa-miR-4429	CLIP-seq
MIRT1358965	hsa-miR-4447	CLIP-seq
MIRT1358966	hsa-miR-4472	CLIP-seq
MIRT1358967	hsa-miR-4473	CLIP-seq
MIRT1358968	hsa-miR-4481	CLIP-seq
MIRT1358969	hsa-miR-4489	CLIP-seq
MIRT1358970	hsa-miR-4515	CLIP-seq
MIRT1358971	hsa-miR-4525	CLIP-seq
MIRT1358972	hsa-miR-454	CLIP-seq
MIRT1358973	hsa-miR-4648	CLIP-seq
MIRT1358974	hsa-miR-4658	CLIP-seq
MIRT1358975	hsa-miR-4665-5p	CLIP-seq
MIRT1358976	hsa-miR-4671-3p	CLIP-seq
MIRT1358977	hsa-miR-4685-5p	CLIP-seq
MIRT1358978	hsa-miR-4691-5p	CLIP-seq
MIRT1358979	hsa-miR-4740-3p	CLIP-seq
MIRT1358980	hsa-miR-4745-5p	CLIP-seq
MIRT1358981	hsa-miR-4758-5p	CLIP-seq
MIRT1358982	hsa-miR-515-5p	CLIP-seq
MIRT1358983	hsa-miR-519a	CLIP-seq
MIRT1358984	hsa-miR-519b-3p	CLIP-seq
MIRT1358985	hsa-miR-519c-3p	CLIP-seq
MIRT1358986	hsa-miR-519d	CLIP-seq
MIRT1358987	hsa-miR-520a-3p	CLIP-seq
MIRT1358988	hsa-miR-520b	CLIP-seq
MIRT1358989	hsa-miR-520c-3p	CLIP-seq
MIRT1358990	hsa-miR-520d-3p	CLIP-seq
MIRT1358991	hsa-miR-520e	CLIP-seq
MIRT1358992	hsa-miR-520g	CLIP-seq
MIRT1358993	hsa-miR-520h	CLIP-seq
MIRT1358994	hsa-miR-541	CLIP-seq
MIRT1358995	hsa-miR-548ac	CLIP-seq
MIRT1358996	hsa-miR-548ae	CLIP-seq
MIRT1358997	hsa-miR-548aj	CLIP-seq
MIRT1358998	hsa-miR-548am	CLIP-seq
MIRT1358999	hsa-miR-548d-3p	CLIP-seq
MIRT1359000	hsa-miR-548x	CLIP-seq
MIRT1359001	hsa-miR-548z	CLIP-seq
MIRT1359002	hsa-miR-625	CLIP-seq
MIRT1359003	hsa-miR-631	CLIP-seq
MIRT1359004	hsa-miR-654-5p	CLIP-seq
MIRT1359005	hsa-miR-663	CLIP-seq
MIRT1359006	hsa-miR-877	CLIP-seq
MIRT1359007	hsa-miR-93	CLIP-seq
MIRT1358916	hsa-miR-1273g	CLIP-seq
MIRT1358917	hsa-miR-1275	CLIP-seq
MIRT1358919	hsa-miR-1303	CLIP-seq
MIRT1358920	hsa-miR-130a	CLIP-seq
MIRT1358921	hsa-miR-130b	CLIP-seq
MIRT1358923	hsa-miR-1908	CLIP-seq
MIRT1358927	hsa-miR-19a	CLIP-seq
MIRT1358928	hsa-miR-19b	CLIP-seq
MIRT2106269	hsa-miR-21	CLIP-seq
MIRT1358932	hsa-miR-301a	CLIP-seq
MIRT1358933	hsa-miR-301b	CLIP-seq
MIRT1358939	hsa-miR-3119	CLIP-seq
MIRT2106270	hsa-miR-3149	CLIP-seq
MIRT2106271	hsa-miR-3150a-3p	CLIP-seq
MIRT2106272	hsa-miR-3175	CLIP-seq
MIRT1358942	hsa-miR-320a	CLIP-seq
MIRT1358943	hsa-miR-320b	CLIP-seq
MIRT1358944	hsa-miR-320c	CLIP-seq
MIRT1358945	hsa-miR-320d	CLIP-seq
MIRT1358946	hsa-miR-320e	CLIP-seq
MIRT2106273	hsa-miR-340	CLIP-seq
MIRT1358947	hsa-miR-3591-5p	CLIP-seq
MIRT2106274	hsa-miR-3613-3p	CLIP-seq
MIRT2106275	hsa-miR-3618	CLIP-seq
MIRT2106276	hsa-miR-3622a-3p	CLIP-seq
MIRT2106277	hsa-miR-3622b-3p	CLIP-seq
MIRT2106278	hsa-miR-362-5p	CLIP-seq
MIRT1358949	hsa-miR-3649	CLIP-seq
MIRT1358950	hsa-miR-3661	CLIP-seq
MIRT1358951	hsa-miR-3666	CLIP-seq
MIRT2106279	hsa-miR-4254	CLIP-seq
MIRT2106280	hsa-miR-4271	CLIP-seq
MIRT1358960	hsa-miR-4295	CLIP-seq
MIRT2106281	hsa-miR-4419a	CLIP-seq
MIRT1358964	hsa-miR-4429	CLIP-seq
MIRT2106282	hsa-miR-4434	CLIP-seq
MIRT1358967	hsa-miR-4473	CLIP-seq
MIRT1358968	hsa-miR-4481	CLIP-seq
MIRT2106283	hsa-miR-4510	CLIP-seq
MIRT2106284	hsa-miR-4516	CLIP-seq
MIRT1358971	hsa-miR-4525	CLIP-seq
MIRT2106285	hsa-miR-4536	CLIP-seq
MIRT1358972	hsa-miR-454	CLIP-seq
MIRT1358973	hsa-miR-4648	CLIP-seq
MIRT2106286	hsa-miR-4651	CLIP-seq
MIRT1358974	hsa-miR-4658	CLIP-seq
MIRT1358975	hsa-miR-4665-5p	CLIP-seq
MIRT1358976	hsa-miR-4671-3p	CLIP-seq
MIRT2106287	hsa-miR-4711-3p	CLIP-seq
MIRT2106288	hsa-miR-4725-3p	CLIP-seq
MIRT1358980	hsa-miR-4745-5p	CLIP-seq
MIRT1358981	hsa-miR-4758-5p	CLIP-seq
MIRT2106289	hsa-miR-491-5p	CLIP-seq
MIRT2106290	hsa-miR-495	CLIP-seq
MIRT2106291	hsa-miR-500b	CLIP-seq
MIRT2106292	hsa-miR-502-5p	CLIP-seq
MIRT2106293	hsa-miR-518a-5p	CLIP-seq
MIRT1358983	hsa-miR-519a	CLIP-seq
MIRT1358984	hsa-miR-519b-3p	CLIP-seq
MIRT1358985	hsa-miR-519c-3p	CLIP-seq
MIRT2106294	hsa-miR-527	CLIP-seq
MIRT1358994	hsa-miR-541	CLIP-seq
MIRT2106295	hsa-miR-576-3p	CLIP-seq
MIRT2106296	hsa-miR-590-5p	CLIP-seq
MIRT2106297	hsa-miR-608	CLIP-seq
MIRT1359002	hsa-miR-625	CLIP-seq
MIRT1359003	hsa-miR-631	CLIP-seq
MIRT2106298	hsa-miR-649	CLIP-seq
MIRT1359004	hsa-miR-654-5p	CLIP-seq
MIRT1359005	hsa-miR-663	CLIP-seq
MIRT1359006	hsa-miR-877	CLIP-seq
MIRT2106299	hsa-miR-934	CLIP-seq
MIRT2106300	hsa-miR-939	CLIP-seq
MIRT2330584	hsa-miR-1236	CLIP-seq
MIRT2330585	hsa-miR-1254	CLIP-seq
MIRT1358916	hsa-miR-1273g	CLIP-seq
MIRT2330586	hsa-miR-1913	CLIP-seq
MIRT1358924	hsa-miR-1915	CLIP-seq
MIRT2106269	hsa-miR-21	CLIP-seq
MIRT1358931	hsa-miR-2277-3p	CLIP-seq
MIRT2330587	hsa-miR-2861	CLIP-seq
MIRT2330588	hsa-miR-3116	CLIP-seq
MIRT1358939	hsa-miR-3119	CLIP-seq
MIRT2106271	hsa-miR-3150a-3p	CLIP-seq
MIRT2106272	hsa-miR-3175	CLIP-seq
MIRT1358940	hsa-miR-3189-3p	CLIP-seq
MIRT2330589	hsa-miR-3194-5p	CLIP-seq
MIRT2330590	hsa-miR-324-3p	CLIP-seq
MIRT2330591	hsa-miR-331-3p	CLIP-seq
MIRT2106274	hsa-miR-3613-3p	CLIP-seq
MIRT1358948	hsa-miR-361-3p	CLIP-seq
MIRT2106276	hsa-miR-3622a-3p	CLIP-seq
MIRT2106277	hsa-miR-3622b-3p	CLIP-seq
MIRT2330592	hsa-miR-3691-3p	CLIP-seq
MIRT1358955	hsa-miR-3918	CLIP-seq
MIRT1358956	hsa-miR-3936	CLIP-seq
MIRT2330593	hsa-miR-3944-5p	CLIP-seq
MIRT2106279	hsa-miR-4254	CLIP-seq
MIRT1358958	hsa-miR-4260	CLIP-seq
MIRT1358959	hsa-miR-4283	CLIP-seq
MIRT2330594	hsa-miR-4292	CLIP-seq
MIRT2330595	hsa-miR-4313	CLIP-seq
MIRT1358961	hsa-miR-4323	CLIP-seq
MIRT2106281	hsa-miR-4419a	CLIP-seq
MIRT1358963	hsa-miR-4424	CLIP-seq
MIRT2106282	hsa-miR-4434	CLIP-seq
MIRT1358968	hsa-miR-4481	CLIP-seq
MIRT1358969	hsa-miR-4489	CLIP-seq
MIRT2106283	hsa-miR-4510	CLIP-seq
MIRT2106284	hsa-miR-4516	CLIP-seq
MIRT2106285	hsa-miR-4536	CLIP-seq
MIRT2106286	hsa-miR-4651	CLIP-seq
MIRT1358977	hsa-miR-4685-5p	CLIP-seq
MIRT2330596	hsa-miR-4727-5p	CLIP-seq
MIRT1358979	hsa-miR-4740-3p	CLIP-seq
MIRT1358980	hsa-miR-4745-5p	CLIP-seq
MIRT2330597	hsa-miR-4746-3p	CLIP-seq
MIRT2330598	hsa-miR-4762-5p	CLIP-seq
MIRT2330599	hsa-miR-4768-5p	CLIP-seq
MIRT2330600	hsa-miR-4775	CLIP-seq
MIRT2106289	hsa-miR-491-5p	CLIP-seq
MIRT2106290	hsa-miR-495	CLIP-seq
MIRT1358982	hsa-miR-515-5p	CLIP-seq
MIRT1358983	hsa-miR-519a	CLIP-seq
MIRT1358984	hsa-miR-519b-3p	CLIP-seq
MIRT1358985	hsa-miR-519c-3p	CLIP-seq
MIRT2330601	hsa-miR-544	CLIP-seq
MIRT1358995	hsa-miR-548ac	CLIP-seq
MIRT1358996	hsa-miR-548ae	CLIP-seq
MIRT1358997	hsa-miR-548aj	CLIP-seq
MIRT1358998	hsa-miR-548am	CLIP-seq
MIRT1358999	hsa-miR-548d-3p	CLIP-seq
MIRT2330602	hsa-miR-548q	CLIP-seq
MIRT1359000	hsa-miR-548x	CLIP-seq
MIRT1359001	hsa-miR-548z	CLIP-seq
MIRT2106296	hsa-miR-590-5p	CLIP-seq
MIRT2330603	hsa-miR-604	CLIP-seq
MIRT2106297	hsa-miR-608	CLIP-seq
MIRT2330604	hsa-miR-627	CLIP-seq
MIRT2330605	hsa-miR-647	CLIP-seq
MIRT2330606	hsa-miR-924	CLIP-seq
MIRT2106300	hsa-miR-939	CLIP-seq

Show/Hide all(13)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000978	Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	IBA
GO:0003677	Function	DNA binding	IEA
GO:0003700	Function	DNA-binding transcription factor activity	IBA
GO:0003700	Function	DNA-binding transcription factor activity	IDA	10825161
GO:0005634	Component	Nucleus	IBA
GO:0005634	Component	Nucleus	IEA
GO:0005634	Component	Nucleus	NAS	10825161
GO:0005737	Component	Cytoplasm	IEA
GO:0006355	Process	Regulation of DNA-templated transcription	IDA	10825161
GO:0006357	Process	Regulation of transcription by RNA polymerase II	IBA
GO:0008270	Function	Zinc ion binding	IEA
GO:0016607	Component	Nuclear speck	IDA
GO:0046872	Function	Metal ion binding	IEA

MIM	HGNC	e!Ensembl
609493	15930	ENSG00000125520

Protein

UniProt ID

Q9NR83

Protein name

SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington disease gene regulatory region-binding protein 1) (HDBP-1)

Protein function

Transcription factor involved in SLC2A4 and HD gene transactivation. Binds to the consensus sequence 5'-GCCGGCG-3'.

PDB

7DTA

Family and domains

Tissue specificity

TISSUE SPECIFICITY: According to PubMed:14630949, expressed in heart, skeletal muscle, liver, kidney and pancreas; undetectable in lung, placenta or brain. According to PubMed:14625278, ubiquitously expressed, with lowest expression in brain and ileum. {E

Sequence

MERPPPRAAGRDPSALRAEAPWLRAEGPGPRAAPVTVPTPPQGSSVGGGFAGLEFARPQE
SEPRASDLGAPRTWTGAAAGPRTPSAHIPVPAQRATPGKARLDEVMAAAALTSLSTSPLL
LGAPVAAFSPEPGLEPWKEALVRPPGSYSSSSNSGDWGWDLASDQSSPSTPSPPLPPEAA
HFLFGEPTLRKRKSPAQVMFQCLWKSCGKVLSTASAMQRHIRLVHLGRQAEPEQSDGEED
FYYTELDVGVDTLTDGLSSLTPVSPTASMPPAFPRLELPELLEPPALPSPLRPPAPPLPP
PPVLSTVANPQSCHSDRVYQGCLTPARLEPQPTEVGACPPALSSRIGVTLRKPRGDAKKC
RKVYGMERRDLWCTACRWKKACQRFLD

Sequence length

387

Interactions

View interactions

Show/Hide Unknown Diseases (3)

Disease merge term	Disease name	Evidence	References	Source
Unknown Includes: (1) ClinVar NON-pathogenic variants (Uncertain, Benign, Conflicting, VUS), (2) GenCC associations, (3) GWAS associations, (4) CBGDA evidence-based associations. NOTE: Diseases with pathogenic evidence are excluded to avoid conflicts.
Asthma	Asthma	N/A	N/A	GWAS
Multiple Sclerosis	Multiple sclerosis	N/A	N/A	GWAS
Prostate cancer	Prostate cancer	N/A	N/A	GWAS

Show/Hide Text Mining Associations (7)

Disease Name	Relationship Type	References
Associations from Text Mining Disease associations identified through Pubtator
Atherosclerosis	Associate	24819318
Breast Neoplasms	Associate	21172654
Carcinogenesis	Associate	21172654
Drug Related Side Effects and Adverse Reactions	Associate	33767353
Glioma	Associate	27677590
Multiple Sclerosis	Associate	31932686, 32518073, 36991503
Neoplasm Metastasis	Associate	32657779

SLC2A4RG (SLC2A4 regulator)