Gene Gene information from NCBI Gene database.
Entrez ID 55252
Gene name ASXL transcriptional regulator 2
Gene symbol ASXL2
Synonyms (NCBI Gene)
ASXH2SHAPNS
Chromosome 2
Chromosome location 2p23.3
Summary This gene encodes a member of a family of epigenetic regulators that bind various histone-modifying enzymes and are involved in the assembly of transcription factors at specific genomic loci. Naturally occurring mutations in this gene are associated with
SNPs SNP information provided by dbSNP.
11
SNP ID Visualize variation Clinical significance Consequence
rs886041065 G>- Pathogenic Coding sequence variant, frameshift variant
rs886041066 ->C Pathogenic Coding sequence variant, frameshift variant
rs886041067 GTTG>- Pathogenic Coding sequence variant, frameshift variant
rs886041068 G>- Pathogenic Coding sequence variant, frameshift variant
rs886041069 TCCC>- Pathogenic Coding sequence variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
432
miRTarBase ID miRNA Experiments Reference
MIRT000819 hsa-miR-15a-5p Microarray 18362358
MIRT000818 hsa-miR-16-5p Microarray 18362358
MIRT046874 hsa-miR-221-3p CLASH 23622248
MIRT044010 hsa-miR-378a-5p CLASH 23622248
MIRT043632 hsa-miR-326 CLASH 23622248
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
17
GO ID Ontology Definition Evidence Reference
GO:0003677 Function DNA binding IEA
GO:0003682 Function Chromatin binding IBA
GO:0005515 Function Protein binding IPI 28514442, 32296183, 35512704
GO:0005634 Component Nucleus IEA
GO:0005654 Component Nucleoplasm IDA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612991 23805 ENSG00000143970
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q76L83
Protein name Putative Polycomb group protein ASXL2 (Additional sex combs-like protein 2)
Protein function Putative Polycomb group (PcG) protein. PcG proteins act by forming multiprotein complexes, which are required to maintain the transcriptionally repressive state of homeotic genes throughout development. PcG proteins are not required to initiate
PDB 9ATN
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05066 HARE-HTH 11 83 HB1, ASXL, restriction endonuclease HTH domain Family
PF13919 ASXH 256 380 Asx homology domain Domain
PF13922 PHD_3 1373 1433 PHD domain of transcriptional enhancer, Asx Domain
Sequence
MREKGRRKKGRTWAEAAKTVLEKYPNTPMSHKEILQVIQREGLKEIRSGTSPLACLNAML
HTNSRGEEGIFYKVPGRMGVYTL
KKDVPDGVKELSEGSEESSDGQSDSQSSENSSSSSDG
GSNKEGKKSRWKRKVSSSSPQSGCPSPTIPAGKVISPSQKHSKKALKQALKQQQQKKQQQ
QCRPSISISSNQHLSLKTVKAASDSVPAKPATWEGKQSDGQTGSPQNSNSSFSSSVKVEN
TLLGLGKKSFQRSERLHTRQMKRTKCADIDVETPDSILVNTNLRALINKHTFSVLPGDCQ
QRLLLLLPEVDRQVGPDGLMKLNGSALNNEFFTSAAQGWKERLSEGEFTPEMQVRIRQEI
EKEKKVEPWKEQFFESYYGQ
SSGLSLEDSKKLTASPSDPKVKKTPAEQPKSMPVSEASLI
RIVPVVSQSECKEEALQMSSPGRKEECESQGEVQPNFSTSSEPLLSSALNTHELSSILPI
KCPKDEDLLEQKPVTSAEQESEKNHLTTASNYNKSESQESLVTSPSKPKSPGVEKPIVKP
TAGAGPQETNMKEPLATLVDQSPESLKRKSSLTQEEAPVSWEKRPRVTENRQHQQPFQVS
PQPFLNRGDRIQVRKVPPLKIPVSRISPMPFHPSQVSPRARFPVSITSPNRTGARTLADI
KAKAQLVKAQRAAAAAAAAAAAAASVGGTIPGPGPGGGQGPGEGGEGQTARGGSPGSDRV
SETGKGPTLELAGTGSRGGTRELLPCGPETQPQSETKTTPSQAQPHSVSGAQLQQTPPVP
PTPAVSGACTSVPSPAHIEKLDNEKLNPTRATATVASVSHPQGPSSCRQEKAPSPTGPAL
ISGASPVHCAADGTVELKAGPSKNIPNPSASSKTDASVPVAVTPSPLTSLLTTATLEKLP
VPQVSATTAPAGSAPPSSTLPAASSLKTPGTSLNMNGPTLRPTSSIPANNPLVTQLLQGK
DVPMEQILPKPLTKVEMKTVPLTAKEERGMGALIATNTTENSTREEVNERQSHPATQQQL
GKTLQSKQLPQVPRPLQLFSAKELRDSSIDTHQYHEGLSKATQDQILQTLIQRVRRQNLL
SVVPPSQFNFAHSGFQLEDISTSQRFMLGFAGRRTSKPAMAGHYLLNISTYGRGSESFRR
THSVNPEDRFCLSSPTEALKMGYTDCKNATGESSSSKEDDTDEESTGDEQESVTVKEEPQ
VSQSAGKGDTSSGPHSRETLSTSDCLASKNVKAEIPLNEQTTLSKENYLFTRGQTFDEKT
LARDLIQAAQKQMAHAVRGKAIRSSPELFSSTVLPLPADSPTHQPLLLPPLQTPKLYGSP
TQIGPSYRGMINVSTSSDMDHNSAVPGSQVSSNVGDVMSFSVTVTTIPASQAMNPSSHGQ
TIPVQAFSEENSIEGTPSKCYCRLKAMIMCKGCGAFCHDDCIGPSKLCVSCLV
VR
Sequence length 1435
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Polycomb repressive complex   UCH proteinases
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
104
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autism spectrum disorder Likely pathogenic rs1574390972 RCV003127412
Shashi-Pena syndrome Pathogenic; Likely pathogenic rs1574390728, rs2149136105, rs2465315580, rs2465305772, rs886041065, rs886041066, rs886041067, rs886041068, rs886041069, rs886041070, rs2465315449, rs1574395471, rs1574395479 RCV002227946
RCV001823012
RCV002795915
RCV003140538
RCV000258822
RCV000258833
RCV000258843
RCV000258823
RCV000258835
RCV000258846
RCV004577266
RCV000825018
RCV000824972
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormal cerebellum morphology Uncertain significance rs2149146353 RCV001391292
Acute myeloid leukemia Benign rs144145474 RCV005913250
ASXL2-related disorder Conflicting classifications of pathogenicity; Likely benign; Benign; Uncertain significance rs572342520, rs376795439, rs371658847, rs200842793, rs768734738, rs758650452, rs368969988, rs200059955, rs2088015648, rs2465305255, rs2465467795, rs1237021764, rs2465314747, rs2465314149, rs371044436
View all (18 more)
RCV004743622
RCV003911129
RCV004744303
RCV003950952
RCV003963602
RCV003953889
RCV003916592
RCV003936463
RCV003399690
RCV003402475
RCV003402397
RCV003397314
RCV003394376
RCV003394393
RCV003966644
RCV003971854
RCV003931419
RCV003946999
RCV004741764
RCV003913304
RCV003926084
RCV003962858
RCV004726747
RCV003920660
RCV003910654
RCV003923097
RCV003932883
RCV003958094
RCV003977982
RCV003960449
RCV004726734
RCV003962958
RCV003972983
Cholangiocarcinoma Benign rs144145474 RCV005913251
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Atherosclerosis Associate 32945427
Bainbridge Ropers syndrome Associate 27693232
Colorectal Neoplasms Associate 32945427
Developmental Disabilities Associate 27693232, 37493007
Diabetes Mellitus Associate 32945427
Esophageal Squamous Cell Carcinoma Associate 32945427
Growth Disorders Associate 27693232
Heart Diseases Associate 37493007
Hypertension Associate 32945427
Intellectual Disability Associate 27693232