Gene Gene information from NCBI Gene database.
Entrez ID 54845
Gene name Epithelial splicing regulatory protein 1
Gene symbol ESRP1
Synonyms (NCBI Gene)
DFNB109RBM35ARMB35A
Chromosome 8
Chromosome location 8q22.1
Summary ESPR1 is an epithelial cell-type-specific splicing regulator (Warzecha et al., 2009 [PubMed 19285943]).[supplied by OMIM, Aug 2009]
SNPs SNP information provided by dbSNP.
2
SNP ID Visualize variation Clinical significance Consequence
rs1554577339 ATGATAACACCGTAGTCAG>- Pathogenic Coding sequence variant, frameshift variant
rs1554577402 C>G Pathogenic Coding sequence variant, missense variant
miRNA miRNA information provided by mirtarbase database.
325
miRTarBase ID miRNA Experiments Reference
MIRT016986 hsa-miR-335-5p Microarray 18185580
MIRT636556 hsa-miR-25-3p HITS-CLIP 23824327
MIRT636555 hsa-miR-32-5p HITS-CLIP 23824327
MIRT636554 hsa-miR-363-3p HITS-CLIP 23824327
MIRT636553 hsa-miR-367-3p HITS-CLIP 23824327
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
19
GO ID Ontology Definition Evidence Reference
GO:0003676 Function Nucleic acid binding IEA
GO:0003723 Function RNA binding IEA
GO:0003729 Function MRNA binding IBA
GO:0003729 Function MRNA binding IDA 19285943
GO:0003729 Function MRNA binding IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
612959 25966 ENSG00000104413
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q6NXG1
Protein name Epithelial splicing regulatory protein 1 (RNA-binding motif protein 35A) (RNA-binding protein 35A)
Protein function mRNA splicing factor that regulates the formation of epithelial cell-specific isoforms. Specifically regulates the expression of FGFR2-IIIb, an epithelial cell-specific isoform of FGFR2. Also regulates the splicing of CD44, CTNND1, ENAH, 3 trans
PDB 2DHA , 2RVJ , 7VKI , 7VKJ , 7WRN
Family and domains
Tissue specificity TISSUE SPECIFICITY: Epithelial cell-specific. {ECO:0000269|PubMed:19285943}.
Sequence
MTASPDYLVVLFGITAGATGAKLGSDEKELILLFWKVVDLANKKVGQLHEVLVRPDQLEL
TEDCKEETKIDVESLSSASQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHP
EASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVATMTEYLNFEKSSSVSRYGASQ
VEDMGNIILAMISEPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQD
IARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKA
TGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATAEEVVAFFGQHCPITGGKEGIL
FVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAP
LIPLPTPPIIPVLPQQFVPPTNVRDCIRLRGLPYAATIEDILDFLGEFATDIRTHGVHMV
LNHQGRPSGDAFIQMKSADRAFMAAQKCHKKNMKDRYVEVFQCSAEEMNFVLMGGTLNRN
GLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVILNPRALQPSTAYYPAGTQLFMN
YTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYAT
EDGLIHTNDQARTLPKEWVCI
Sequence length 681
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Signaling by BRAF and RAF fusions
FGFR2 alternative splicing
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
25
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Hearing loss, autosomal recessive 109 Pathogenic rs1554577339, rs1554577402 RCV000656490
RCV000656491
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
ESRP1-related disorder Benign; Likely benign rs1549466, rs12677519, rs192126694, rs1204240039, rs367813636, rs139527251, rs1817620727, rs55760931, rs199645269, rs77843571, rs753093658, rs558995753, rs72676907, rs368959736, rs137914711
View all (2 more)
RCV003975838
RCV003975839
RCV003943420
RCV003921915
RCV003964525
RCV003974036
RCV003899184
RCV003939824
RCV003939779
RCV003914540
RCV003922010
RCV003924662
RCV003982068
RCV003957264
RCV003976633
RCV003905920
RCV003970804
Familial cancer of breast Benign rs140398032 RCV005910039
Thymoma Benign rs558995753 RCV005933152
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenomyosis Associate 37019419
Adie Syndrome Associate 38303513
Breast Neoplasms Associate 26646320, 27911856, 30042172, 30665944, 31755218, 35887187, 36925195
Breast Neoplasms Stimulate 34262011
Calcinosis Cutis Associate 25169209
Carcinogenesis Associate 31570856, 31963158, 32964032
Carcinoma Stimulate 34903603
Carcinoma Non Small Cell Lung Associate 20980099, 34342121
Carcinoma Renal Cell Associate 35876041
Cell Transformation Neoplastic Associate 31963158