Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
54820
Gene name Gene Name - the full gene name approved by the HGNC.
NudE neurodevelopment protein 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
NDE1
Synonyms (NCBI Gene) Gene synonyms aliases
HOM-TES-87, LIS4, MHAC, NDE, NUDE, NUDE1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
LIS4, MHAC
Chromosome Chromosome number
16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
16p13.11
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the nuclear distribution E (NudE) family of proteins. The encoded protein is localized at the centrosome and interacts with other centrosome components as part of a multiprotein complex that regulates dynein function. This pr
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs147174812 G>A Conflicting-interpretations-of-pathogenicity, uncertain-significance, likely-benign Intron variant
rs398123577 G>A Pathogenic Splice acceptor variant
rs576928842 C>A,G,T Pathogenic Missense variant, synonymous variant, stop gained, coding sequence variant
rs749768828 C>-,CC Pathogenic Frameshift variant, coding sequence variant
rs756206942 AC>- Pathogenic Frameshift variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT022760 hsa-miR-124-3p Microarray 18668037
MIRT024682 hsa-miR-215-5p Microarray 19074876
MIRT026541 hsa-miR-192-5p Microarray 19074876
MIRT028581 hsa-miR-30a-5p Proteomics 18668040
MIRT050211 hsa-miR-25-3p CLASH 23622248
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000086 Process G2/M transition of mitotic cell cycle TAS
GO:0000132 Process Establishment of mitotic spindle orientation IBA 21873635
GO:0000132 Process Establishment of mitotic spindle orientation IMP 19468067
GO:0000776 Component Kinetochore IBA 21873635
GO:0000776 Component Kinetochore IDA 17600710
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
609449 17619 ENSG00000072864
Protein
UniProt ID Q9NXR1
Protein name Nuclear distribution protein nudE homolog 1 (NudE)
Protein function Required for centrosome duplication and formation and function of the mitotic spindle. Essential for the development of the cerebral cortex. May regulate the production of neurons by controlling the orientation of the mitotic spindle during divi
PDB 7E1T
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04880 NUDE_C 134 312 NUDE protein, C-terminal conserved region Family
Tissue specificity TISSUE SPECIFICITY: Expressed in the neuroepithelium throughout the developing brain, including the cerebral cortex and cerebellum. {ECO:0000269|PubMed:21529752}.
Sequence
MEDSGKTFSSEEEEANYWKDLAMTYKQRAENTQEELREFQEGSREYEAELETQLQQIETR
NRDLLSENNRLRMELETIKEKFEVQHSEGYRQISALEDDLAQTKAIKDQLQKYIRELEQA
NDDLERAKRATIMSLEDFEQRLNQAIERNAFLESELDEKENLLESVQRLKDEARDLRQEL
AVQQKQEKPRTPMPSSVEAERTDTAVQATGSVPSTPIAHRGPSSSLNTPGSFRRGLDDST
GGTPLTPAARISALNIVGDLLRKVGALESKLASCRNLVYDQSPNRTGGPASGRSSKNRDG
GERRPSSTSVPL
GDKGLDTSCRWLSKSTTRSSSSC
Sequence length 335
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Anchoring of the basal body to the plasma membrane
RHO GTPases Activate Formins
Mitotic Prometaphase
AURKA Activation by TPX2
EML4 and NUDC in mitotic spindle formation
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Agenesis of corpus callosum Agenesis of corpus callosum rs754914260, rs1057519053, rs1057519056, rs1057519054, rs1057519055, rs1057519057, rs1384496494, rs1599017933
Aortic aneurysm Aortic aneurysm, familial thoracic 4 rs1555554098, rs267606902, rs121434526, rs121434527, rs121434528, rs387906592, rs387906781, rs387906782, rs397516685, rs397514037, rs112901682, rs397515325, rs397515330, rs794728025, rs112602953
View all (29 more)
16444274, 21937134, 27611364
Developmental delay Global developmental delay, Profound global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Mental retardation Severe intellectual disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
Unknown
Disease term Disease name Evidence References Source
Hydranencephaly hydranencephaly GenCC
Psoriasis Psoriasis GWAS
Associations from Text Mining
Disease Name Relationship Type References
Alcoholism Associate 19786961
Alzheimer Disease Associate 34981809
Behcet Syndrome Associate 25332407
Bernard Soulier Syndrome Associate 23704059
Depressive Disorder Associate 19300510
Disease Associate 21853134
Dyslexia Associate 19786961
Epilepsy Familial Mesial Temporal Lobe Associate 22523559
Fetal Diseases Associate 23704059
Glioma Associate 37349788