Gene Details | GeDiPNet - Complete Gene Info, Disease Associations & Pathways

Gene Gene information from NCBI Gene database. Gene miRNA Gene ontology Other IDs Protein Associated diseases
Entrez ID	51760
Gene name	Synaptotagmin 17
Gene symbol	SYT17
Synonyms (NCBI Gene)	Syt-17sytXVII
Chromosome	16
Chromosome location	16p12.3

227

Show/Hide all (227)

miRTarBase ID	miRNA	Experiments	Reference
MIRT018929	hsa-miR-335-5p	Microarray	18185580
MIRT607313	hsa-miR-8485	HITS-CLIP	22927820
MIRT663407	hsa-miR-329-3p	HITS-CLIP	22927820
MIRT663406	hsa-miR-362-3p	HITS-CLIP	22927820
MIRT607312	hsa-miR-603	HITS-CLIP	22927820
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	22927820
MIRT663403	hsa-miR-3941	HITS-CLIP	22927820
MIRT663402	hsa-miR-4672	HITS-CLIP	22927820
MIRT663401	hsa-miR-466	HITS-CLIP	22927820
MIRT607313	hsa-miR-8485	HITS-CLIP	23313552
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23313552
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23313552
MIRT607312	hsa-miR-603	HITS-CLIP	23313552
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23313552
MIRT663403	hsa-miR-3941	HITS-CLIP	23313552
MIRT663402	hsa-miR-4672	HITS-CLIP	23313552
MIRT663401	hsa-miR-466	HITS-CLIP	23313552
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT663408	hsa-miR-4796-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663405	hsa-miR-520g-3p	HITS-CLIP	23824327
MIRT663404	hsa-miR-520h	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	24906430
MIRT607312	hsa-miR-603	HITS-CLIP	24906430
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	24906430
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	27418678
MIRT607312	hsa-miR-603	HITS-CLIP	27418678
MIRT607313	hsa-miR-8485	HITS-CLIP	27418678
MIRT663407	hsa-miR-329-3p	HITS-CLIP	28735896
MIRT663406	hsa-miR-362-3p	HITS-CLIP	28735896
MIRT663403	hsa-miR-3941	HITS-CLIP	28735896
MIRT663401	hsa-miR-466	HITS-CLIP	28735896
MIRT663402	hsa-miR-4672	HITS-CLIP	28735896
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	28735896
MIRT607312	hsa-miR-603	HITS-CLIP	28735896
MIRT607313	hsa-miR-8485	HITS-CLIP	28735896
MIRT607313	hsa-miR-8485	HITS-CLIP	22927820
MIRT663407	hsa-miR-329-3p	HITS-CLIP	22927820
MIRT663406	hsa-miR-362-3p	HITS-CLIP	22927820
MIRT607312	hsa-miR-603	HITS-CLIP	22927820
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	22927820
MIRT663403	hsa-miR-3941	HITS-CLIP	22927820
MIRT663402	hsa-miR-4672	HITS-CLIP	22927820
MIRT663401	hsa-miR-466	HITS-CLIP	22927820
MIRT607313	hsa-miR-8485	HITS-CLIP	23313552
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23313552
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23313552
MIRT607312	hsa-miR-603	HITS-CLIP	23313552
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23313552
MIRT663403	hsa-miR-3941	HITS-CLIP	23313552
MIRT663402	hsa-miR-4672	HITS-CLIP	23313552
MIRT663401	hsa-miR-466	HITS-CLIP	23313552
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT663408	hsa-miR-4796-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT663407	hsa-miR-329-3p	HITS-CLIP	23824327
MIRT663406	hsa-miR-362-3p	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT663405	hsa-miR-520g-3p	HITS-CLIP	23824327
MIRT663404	hsa-miR-520h	HITS-CLIP	23824327
MIRT663403	hsa-miR-3941	HITS-CLIP	23824327
MIRT663402	hsa-miR-4672	HITS-CLIP	23824327
MIRT663401	hsa-miR-466	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327
MIRT607313	hsa-miR-8485	HITS-CLIP	23824327
MIRT607312	hsa-miR-603	HITS-CLIP	23824327
MIRT607311	hsa-miR-5003-3p	HITS-CLIP	23824327

Show/Hide all (18)

GO ID	Ontology	Definition	Evidence	Reference
GO:0000149	Function	SNARE binding	IBA
GO:0005515	Function	Protein binding	IPI	16189514, 16730941, 25416956, 28514442, 31515488, 32296183
GO:0005544	Function	Calcium-dependent phospholipid binding	IBA
GO:0005802	Component	Trans-Golgi network	IEA
GO:0005886	Component	Plasma membrane	IBA
GO:0016020	Component	Membrane	IEA
GO:0016192	Process	Vesicle-mediated transport	IBA
GO:0017158	Process	Regulation of calcium ion-dependent exocytosis	IBA
GO:0030154	Process	Cell differentiation	IEA
GO:0061891	Function	Calcium ion sensor activity	IBA
GO:0070382	Component	Exocytic vesicle	IBA
GO:0098794	Component	Postsynapse	IDA	31387992
GO:0098794	Component	Postsynapse	IMP	31387992
GO:0098978	Component	Glutamatergic synapse	IDA	31387992
GO:0098978	Component	Glutamatergic synapse	IMP	31387992
GO:0099149	Process	Regulation of postsynaptic neurotransmitter receptor internalization	IDA	31387992
GO:0099149	Process	Regulation of postsynaptic neurotransmitter receptor internalization	IMP	31387992
GO:1903861	Process	Positive regulation of dendrite extension	IDA	23999003

MIM	HGNC	e!Ensembl
HGNC	N/A	HGNC

Q9BSW7

Protein name

Synaptotagmin-17 (Protein B/K) (Synaptotagmin XVII) (SytXVII)

Protein function

Plays a role in dendrite formation by melanocytes (PubMed:23999003).

PDB

2ENP

Family and domains

Pfam

Accession	ID	Position in sequence	Description	Type
PF00168	C2	199 → 312	C2 domain	Domain
PF00168	C2	336 → 443	C2 domain	Domain

Tissue specificity

TISSUE SPECIFICITY: Expressed abundantly in brain (frontal and temporal lobes, hippocampus, hypothalamus, amygdala, substantia nigra, and pituitary), kidney, and prostate. Expressed in fetal brain, kidney and lung (PubMed:16672768). Expressed in melanocyt

Sequence

MAYIQLEPLNEGFLSRISGLLLCRWTCRHCCQKCYESSCCQSSEDEVEILGPFPAQTPPW
LMASRSSDKDGDSVHTASEVPLTPRTNSPDGRRSSSDTSKSTYSLTRRISSLESRRPSSP
LIDIKPIEFGVLSAKKEPIQPSVLRRTYNPDDYFRKFEPHLYSLDSNSDDVDSLTDEEIL
SKYQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK
NSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEV
DLVKGGHWWKALIPSSQNEVELGELLLSLNYLPSAGRLNVDVIRAKQLLQTDVSQGSDPF
VKIQLVHGLKLVKTKKTSFLRGTIDPFYNESFSFKVPQEELENASLVFTVFGHNMKSSND
FIGRIVIGQYSSGPSETNHWRRMLNTHRTAVEQWHSLRSRAECDRVSPASLEVT

Sequence length

474

Interactions

View interactions

Evidence Score: ★☆☆☆☆ Gene-disease association found in Text Mining only ★★☆☆☆ Found in Text Mining and Unknown/Other Associations ★★★☆☆ Reported in Unknown/Other Associations across ≥2 Sources ★★★★☆ ClinVar: Pathogenic/Likely Pathogenic (<5 Variants) ★★★★★ ClinVar: Pathogenic/Likely Pathogenic (≥5 Variants)

Show/Hide Unknown Diseases (2)

Phenotype Name	Clinical Significance	Source	Evidence Score
Unknown / Other Associations ClinVar entries with uncertain/conflicting evidence, and associations from other databases (OMIM, Orphanet, GWAS, etc.) where the gene is not established as causal.
CORNEAL ASTIGMATISM	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations
PARKINSON DISEASE	—	GWAS catalog	★★★★★ ★★☆☆☆ Found in Text Mining + Unknown/Other Associations

Show/Hide Text Mining Associations (2)

Disease Name	Relationship Type	References	Evidence Score
Associations from Text MiningDisease associations identified through Pubtator
Autoimmune Diseases of the Nervous System	Stimulate	32369831	★★★★★ ★☆☆☆☆ Found in Text Mining only
Neoplasms	Associate	34127544	★★★★★ ★☆☆☆☆ Found in Text Mining only

SYT17 (synaptotagmin 17)