Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
51693
Gene name Gene Name - the full gene name approved by the HGNC.
Trafficking protein particle complex subunit 2L
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
TRAPPC2L
Synonyms (NCBI Gene) Gene synonyms aliases
HSPC176, PERRB
Chromosome Chromosome number
16
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
16q24.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a protein that interacts with the tethering factor trafficking protein particle (TRAPP complex). TRAPP complexes mediate the contact between vescicles and target membranes, and thus, are involved in vescicle-mediated transport of protein
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT648290 hsa-miR-651-3p HITS-CLIP 23824327
MIRT648289 hsa-miR-4762-5p HITS-CLIP 23824327
MIRT648288 hsa-miR-4457 HITS-CLIP 23824327
MIRT648287 hsa-miR-125b-2-3p HITS-CLIP 23824327
MIRT648286 hsa-miR-3183 HITS-CLIP 23824327
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0000139 Component Golgi membrane IEA
GO:0005515 Function Protein binding IPI 16189514, 21453443, 21525244, 21827752, 25416956
GO:0005634 Component Nucleus IBA 21873635
GO:0005737 Component Cytoplasm IBA 21873635
GO:0005783 Component Endoplasmic reticulum IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
610970 30887 ENSG00000167515
Protein
UniProt ID Q9UL33
Protein name Trafficking protein particle complex subunit 2-like protein
Protein function Plays a role in vesicular transport from endoplasmic reticulum to Golgi.
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF04628 Sedlin_N 7 138 Sedlin, N-terminal conserved region Family
Tissue specificity TISSUE SPECIFICITY: Expressed in testis, liver, bladder, lung, spleen and brain, several cell lines and primary chondrocytes cell line. {ECO:0000269|PubMed:19416478}.
Sequence
Sequence length 140
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  Reactome
    COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Developmental regression Developmental regression rs1224421127
Mucopolysaccharidosis Mucopolysaccharidosis, MPS-IV-A rs118204435, rs118204437, rs118204438, rs118204439, rs118204441, rs118204442, rs118204448, rs118204443, rs118204444, rs118204449, rs118204446, rs118204447, rs118203939, rs118203941, rs431905493
View all (577 more)
24726177, 25252036, 16287098, 9375852
Unknown
Disease term Disease name Evidence References Source
Encephalopathy encephalopathy, progressive, early-onset, with episodic rhabdomyolysis GenCC
Associations from Text Mining
Disease Name Relationship Type References
Developmental Disabilities Associate 32843486
Hypersensitivity Delayed Associate 32843486
Intellectual Disability Associate 32843486
Melanoma Associate 31845298
Parkinson Disease Associate 31845298
Post Infectious Disorders Associate 32843486
Quadriplegia Associate 32843486
Rhabdomyolysis Associate 32843486
Wounds and Injuries Associate 36266402