Gene Gene information from NCBI Gene database.
Entrez ID 4646
Gene name Myosin VI
Gene symbol MYO6
Synonyms (NCBI Gene)
DFNA22DFNB37
Chromosome 6
Chromosome location 6q14.1
Summary This gene encodes a reverse-direction motor protein that moves toward the minus end of actin filaments and plays a role in intracellular vesicle and organelle transport. The protein consists of a motor domain containing an ATP- and an actin-binding site a
SNPs SNP information provided by dbSNP.
30
SNP ID Visualize variation Clinical significance Consequence
rs121912557 G>A Pathogenic Genic downstream transcript variant, non coding transcript variant, missense variant, coding sequence variant
rs121912558 C>T Pathogenic Genic downstream transcript variant, non coding transcript variant, stop gained, coding sequence variant
rs121912560 A>G Likely-pathogenic, pathogenic Missense variant, non coding transcript variant, coding sequence variant
rs121912561 C>T Pathogenic Genic downstream transcript variant, non coding transcript variant, stop gained, coding sequence variant
rs139664153 G>A Conflicting-interpretations-of-pathogenicity Genic downstream transcript variant, non coding transcript variant, missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
487
miRTarBase ID miRNA Experiments Reference
MIRT000458 hsa-miR-143-3p qRT-PCRLuciferase reporter assayWestern blot 20353999
MIRT000457 hsa-miR-145-5p qRT-PCRLuciferase reporter assayWestern blot 20353999
MIRT018339 hsa-miR-335-5p Microarray 18185580
MIRT020824 hsa-miR-155-5p Proteomics 18668040
MIRT000458 hsa-miR-143-3p Western blot 19843160
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
83
GO ID Ontology Definition Evidence Reference
GO:0000146 Function Microfilament motor activity IBA
GO:0000166 Function Nucleotide binding IEA
GO:0001726 Component Ruffle IBA
GO:0001726 Component Ruffle IDA 9852149, 16507995
GO:0003774 Function Cytoskeletal motor activity IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600970 7605 ENSG00000196586
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UM54
Protein name Unconventional myosin-VI (Unconventional myosin-6)
Protein function Myosins are actin-based motor molecules with ATPase activity (By similarity). Unconventional myosins serve in intracellular movements (By similarity). Myosin 6 is a reverse-direction motor protein that moves towards the minus-end of actin filame
PDB 2N0Z , 2N10 , 2N11 , 2N12 , 2N13 , 6E5N , 6J56 , 8W41
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00063 Myosin_head 59 759 Myosin head (motor domain) Domain
PF16521 Myosin-VI_CBD 1177 1267 Myosin VI cargo binding domain Domain
Tissue specificity TISSUE SPECIFICITY: Expressed in most tissues examined including heart, brain, placenta, pancreas, spleen, thymus, prostate, testis, ovary, small intestine and colon. Highest levels in brain, pancreas, testis and small intestine. Also expressed in fetal b
Sequence
MEDGKPVWAPHPTDGFQMGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKDVE
DNCSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSEAIKSYQGKSL
GTRPPHVFAIADKAFRDMKVLKMSQSIIVSGESGAGKTENTKFVLRYLTESYGTGQDIDD
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGK
EERNYHIFYRLCAGASEDIREKLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEY
LKAGSMKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSG
GCNLKNKSAQSLEYCAELLGLDQDDLRVSLTTRVMLTTAGGTKGTVIKVPLKVEQANNAR
DALAKTVYSHLFDHVVNRVNQCFPFETSSYFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEAKLVGILDILDEENRLPQPSD
QHFTSAVHQKHKDHFRLTIPRKSKLAVHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA
LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS
TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGYPSRASFHELYNMYKK
YMPDKLARLDPRLFCKALFKALGLNENDYKFGLTKVFFR
PGKFAEFDQIMKSDPDHLAEL
VKRVNHWLTCSRWKKVQWCSLSVIKLKNKIKYRAEACIKMQKTIRMWLCKRRHKPRIDGL
VKVGTLKKRLDKFNEVVSVLKDGKPEMNKQIKNLEISIDTLMAKIKSTMMTQEQIQKEYD
ALVKSSEELLSALQKKKQQEEEAERLRRIQEEMEKERKRREEDEKRRRKEEEERRMKLEM
EAKRKQEEEERKKREDDEKRIQAEVEAQLARQKEEESQQQAVLEQERRDRELALRIAQSE
AELISDEAQADLALRRSLDSYPVSKNDGTRPKMTPEQMAKEMSEFLSRGPAVLATKAAAG
TKKYDLSKWKYAELRDTINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRNTETEQRAP
KSVTDYDFAPFLNNSPQQNPAAQIPARQREIEMNRQQRFFRIPFIRPADQYKDPQSKKKG
WWYAHFDGPWIARQMELHPDKPPILLVAGKDDMEMCELNLEETGLTRKRGAEILPRQFEE
IWERCGG
IQYLQNAIESRQARPTYATAMLQSLLK
Sequence length 1294
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Motor proteins
Pathogenic Escherichia coli infection
Salmonella infection
  Gap junction degradation
Trafficking of AMPA receptors
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
555
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Autosomal dominant nonsyndromic hearing loss Pathogenic rs2150249865 RCV002226798
Autosomal dominant nonsyndromic hearing loss 22 Likely pathogenic; Pathogenic rs749752357, rs2535553134, rs2535544061, rs727504567, rs727503326, rs876657653, rs121912557, rs121912561, rs1562283089, rs878853225, rs2534950585, rs2535543931, rs2535265747, rs1060499799, rs551348450
View all (4 more)
RCV005038155
RCV002286503
RCV002289334
RCV001004798
RCV000763565
RCV004786566
RCV000009108
RCV000009113
RCV000009114
RCV000225059
RCV003155547
RCV003510971
RCV003991292
RCV000454125
RCV003336098
RCV000655894
RCV001004799
RCV001250410
RCV001255960
Autosomal recessive nonsyndromic hearing loss 37 Likely pathogenic; Pathogenic rs749752357, rs2149367858, rs727503326, rs876657653, rs1562201376, rs121912558, rs2535510209, rs1057523846, rs1060499799 RCV005038155
RCV001809338
RCV000763565
RCV003389245
RCV000009109
RCV000009110
RCV003123299
RCV004559056
RCV001808829
Ear malformation Likely pathogenic rs2149288272 RCV001814386
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Acute myeloid leukemia Likely benign rs111493322 RCV005917751
Cervical cancer Conflicting classifications of pathogenicity; Likely benign rs200713129, rs575593385, rs148227849 RCV005931789
RCV005917891
RCV005913967
Familial cancer of breast Benign rs6453845 RCV005915383
Familial prostate cancer Conflicting classifications of pathogenicity rs200713129 RCV005931790
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Adenocarcinoma of Lung Associate 37965333
Atrial Septal Defect Sinus Venosus Associate 29969989
Cardiomyopathy Hypertrophic Associate 16507995, 29969989
Ciliopathies Associate 34957672
Colorectal Neoplasms Associate 27044563, 32993655, 35091088
Deafness Associate 12687499, 23767834, 24105371, 27344577, 27474411, 32048449, 34997062, 35248088, 37872146
Deafness autosomal dominant nonsyndromic sensorineural 22 Associate 12687499, 27474411
Deafness Autosomal Recessive Associate 12687499
Deafness Autosomal Recessive 37 Associate 27474411
Delayed Cranial Ossification due to CBFB Haploinsufficiency Associate 20648052