Gene Gene information from NCBI Gene database.
Entrez ID 3636
Gene name Inositol polyphosphate phosphatase like 1
Gene symbol INPPL1
Synonyms (NCBI Gene)
OPSMDSHIP2
Chromosome 11
Chromosome location 11q13.4
Summary The protein encoded by this gene is an SH2-containing 5`-inositol phosphatase that is involved in the regulation of insulin function. The encoded protein also plays a role in the regulation of epidermal growth factor receptor turnover and actin remodellin
SNPs SNP information provided by dbSNP.
18
SNP ID Visualize variation Clinical significance Consequence
rs655423 G>A,C Pathogenic Splice donor variant
rs368970014 C>G,T Pathogenic Synonymous variant, stop gained, coding sequence variant
rs397514508 C>T Pathogenic Missense variant, coding sequence variant
rs397514509 C>A,G,T Pathogenic Missense variant, stop gained, coding sequence variant
rs397514510 C>T Pathogenic Missense variant, coding sequence variant
miRNA miRNA information provided by mirtarbase database.
205
miRTarBase ID miRNA Experiments Reference
MIRT003238 hsa-miR-205-5p Western blotLuciferase reporter assayNorthern blot 19033458
MIRT003238 hsa-miR-205-5p Western blotLuciferase reporter assayNorthern blot 19033458
MIRT003238 hsa-miR-205-5p Western blotLuciferase reporter assayNorthern blot 19033458
MIRT003238 hsa-miR-205-5p Western blotLuciferase reporter assayNorthern blot 19033458
MIRT004354 hsa-miR-184 Western blotLuciferase reporter assayNorthern blot 19033458
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
56
GO ID Ontology Definition Evidence Reference
GO:0000132 Process Establishment of mitotic spindle orientation ISS
GO:0000922 Component Spindle pole IEA
GO:0000922 Component Spindle pole ISS
GO:0001958 Process Endochondral ossification IMP 23273569
GO:0002376 Process Immune system process IEA
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
600829 6080 ENSG00000165458
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
O15357
Protein name Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 (EC 3.1.3.86) (Inositol polyphosphate phosphatase-like protein 1) (INPPL-1) (Protein 51C) (SH2 domain-containing inositol 5'-phosphatase 2) (SH2 domain-containing inositol phosphatase 2) (SHIP-2)
Protein function Phosphatidylinositol (PtdIns) phosphatase that specifically hydrolyzes the 5-phosphate of phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4,5)P3) to produce PtdIns(3,4)P2, thereby negatively regulating the PI3K (phosphoinositide 3-kinase) pat
PDB 2K4P , 2KSO , 2MK2 , 3NR8 , 4A9C , 5OKM , 5OKN , 5OKO , 5OKP , 6SQU , 6SRR
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF00017 SH2 21 102 SH2 domain Domain
PF03372 Exo_endo_phos 429 718 Endonuclease/Exonuclease/phosphatase family Domain
PF00536 SAM_1 1200 1258 SAM domain (Sterile alpha motif) Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed, most prominently in skeletal muscle, heart and brain. Present in platelets. Expressed in transformed myeloid cells and in primary macrophages, but not in peripheral blood monocytes. {ECO:0000269|PubMed:12676785, ECO:0
Sequence
MASACGAPGPGGALGSQAPSWYHRDLSRAAAEELLARAGRDGSFLVRDSESVAGAFALCV
LYQKHVHTYRILPDGEDFLAVQTSQGVPVRRFQTLGELIGLY
AQPNQGLVCALLLPVEGE
REPDPPDDRDASDGEDEKPPLPPRSGSTSISAPTGPSSPLPAPETPTAPAAESAPNGLST
VSHDYLKGSYGLDLEAVRGGASHLPHLTRTLATSCRRLHSEVDKVLSGLEILSKVFDQQS
SPMVTRLLQQQNLPQTGEQELESLVLKLSVLKDFLSGIQKKALKALQDMSSTAPPAPQPS
TRKAKTIPVQAFEVKLDVTLGDLTKIGKSQKFTLSVDVEGGRLVLLRRQRDSQEDWTTFT
HDRIRQLIKSQRVQNKLGVVFEKEKDRTQRKDFIFVSARKREAFCQLLQLMKNKHSKQDE
PDMISVFIGTWNMGSVPPPKNVTSWFTSKGLGKTLDEVTVTIPHDIYVFGTQENSVGDRE
WLDLLRGGLKELTDLDYRPIAMQSLWNIKVAVLVKPEHENRISHVSTSSVKTGIANTLGN
KGAVGVSFMFNGTSFGFVNCHLTSGNEKTARRNQNYLDILRLLSLGDRQLNAFDISLRFT
HLFWFGDLNYRLDMDIQEILNYISRKEFEPLLRVDQLNLEREKHKVFLRFSEEEISFPPT
YRYERGSRDTYAWHKQKPTGVRTNVPSWCDRILWKSYPETHIICNSYGCTDDIVTSDH
SP
VFGTFEVGVTSQFISKKGLSKTSDQAYIEFESIEAIVKTASRTKFFIEFYSTCLEEYKKS
FENDAQSSDNINFLKVQWSSRQLPTLKPILADIEYLQDQHLLLTVKSMDGYESYGECVVA
LKSMIGSTAQQFLTFLSHRGEETGNIRGSMKVRVPTERLGTRERLYEWISIDKDEAGAKS
KAPSVSRGSQEPRSGSRKPAFTEASCPLSRLFEEPEKPPPTGRPPAPPRAAPREEPLTPR
LKPEGAPEPEGVAAPPPKNSFNNPAYYVLEGVPHQLLPPEPPSPARAPVPSATKNKVAIT
VPAPQLGHHRHPRVGEGSSSDEESGGTLPPPDFPPPPLPDSAIFLPPSLDPLPGPVVRGR
GGAEARGPPPPKAHPRPPLPPGPSPASTFLGEVASGDDRSCSVLQMAKTLSEVDYAPAGP
ARSALLPGPLELQPPRGLPSDYGRPLSFPPPRIRESIQEDLAEEAPCLQGGRASGLGEAG
MSAWLRAIGLERYEEGLVHNGWDDLEFLSDITEEDLEEAGVQDPAHKRLLLDTLQLSK
Sequence length 1258
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Inositol phosphate metabolism
Metabolic pathways
Phosphatidylinositol signaling system
B cell receptor signaling pathway
Fc gamma R-mediated phagocytosis
Insulin signaling pathway
  Synthesis of PIPs at the plasma membrane
Synthesis of IP3 and IP4 in the cytosol
Interleukin receptor SHC signaling
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
78
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Opsismodysplasia Likely pathogenic; Pathogenic rs1948918434, rs1949036008, rs779291537, rs2135438529, rs760925109, rs2135414009, rs2539251135, rs878853119, rs746647683, rs878853123, rs1135401750, rs397514508, rs397514509, rs797044468, rs655423
View all (6 more)
RCV001328856
RCV001330612
RCV001783481
RCV001782304
RCV001824203
RCV002238730
RCV002290261
RCV001824132
RCV000224566
RCV000224467
RCV000496096
RCV000032669
RCV000032670
RCV000032671
RCV000032672
RCV000032673
RCV000032674
RCV000032675
RCV000032676
RCV000032677
RCV001197991
Thyroid cancer, nonmedullary, 1 Likely pathogenic rs1948951076 RCV005928600
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
- no classification for the single variant rs878853122, rs878853120, rs878853121, rs1135401751, rs368970014 -
Adrenocortical carcinoma, hereditary Benign rs11548491 RCV005909706
Cholangiocarcinoma Benign rs11548491 RCV005909710
Familial cancer of breast Likely benign rs201863115 RCV005934827
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Alzheimer Disease Associate 22533436
Breast Neoplasms Associate 19065064, 34990021
Carcinogenesis Stimulate 27716613
Carcinogenesis Inhibit 28117748
Carcinoma Hepatocellular Associate 24228114
Carcinoma Non Small Cell Lung Associate 24133597
Carcinoma Squamous Cell Associate 19033458
Chronic Urticaria Associate 19477690
Colonic Neoplasms Associate 24943349
Colorectal Neoplasms Associate 19433066, 24943349, 25525286