Gene Gene information from NCBI Gene database.
Entrez ID 23431
Gene name Adaptor related protein complex 4 subunit epsilon 1
Gene symbol AP4E1
Synonyms (NCBI Gene)
CPSQ4SPG51STUT1
Chromosome 15
Chromosome location 15q21.2
Summary This gene encodes a member of the adaptor complexes large subunit protein family. These proteins are components of the heterotetrameric adaptor protein complexes, which play important roles in the secretory and endocytic pathways by mediating vesicle form
SNPs SNP information provided by dbSNP.
9
SNP ID Visualize variation Clinical significance Consequence
rs141278078 C>T Benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, non coding transcript variant, genic downstream transcript variant, intron variant
rs143624283 T>C Likely-benign, conflicting-interpretations-of-pathogenicity Non coding transcript variant, coding sequence variant, synonymous variant, 5 prime UTR variant
rs148817957 A>C,G Uncertain-significance, conflicting-interpretations-of-pathogenicity Missense variant, non coding transcript variant, coding sequence variant
rs556450190 G>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
rs754944429 ->TATGT Pathogenic Non coding transcript variant, genic downstream transcript variant, coding sequence variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
583
miRTarBase ID miRNA Experiments Reference
MIRT019500 hsa-miR-148b-3p Microarray 17612493
MIRT481815 hsa-miR-3936 PAR-CLIP 23592263
MIRT481814 hsa-miR-759 PAR-CLIP 23592263
MIRT481813 hsa-miR-922 PAR-CLIP 23592263
MIRT481812 hsa-miR-6773-3p PAR-CLIP 23592263
Gene ontology (GO) Gene Ontology (GO) annotations describing the biological processes, molecular functions, and cellular components associated with a gene.
20
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 26496610, 26542808, 32073997, 33961781
GO:0005794 Component Golgi apparatus IEA
GO:0005802 Component Trans-Golgi network IEA
GO:0005802 Component Trans-Golgi network NAS 10436028
GO:0006605 Process Protein targeting IC 10066790
Other IDs Other IDs provides unique identifiers for this gene in OMIM, HGNC, and Ensembl databases.
MIM HGNC e!Ensembl
607244 573 ENSG00000081014
Protein Protein information from UniProt database.
UniProt ID Unique identifier for the protein in the UniProt database. Click to view detailed protein information.
Q9UPM8
Protein name AP-4 complex subunit epsilon-1 (AP-4 adaptor complex subunit epsilon) (Adaptor-related protein complex 4 subunit epsilon-1) (Epsilon subunit of AP-4) (Epsilon-adaptin)
Protein function Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways (
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01602 Adaptin_N 52 601 Adaptin N terminal region Family
PF14807 AP4E_app_platf 1033 1133 Adaptin AP4 complex epsilon appendage platform Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:10436028}.
Sequence
MSDIVEKTLTALPGLFLQNQPGGGPAAAKASFSSRLGSLVRGITALTSKHEEEKLIQQEL
SSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAV
SLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPCEMIPAVLPLIEDKLQHS
KEIVRRKAVLALYKFHLIAPNQVQHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSGY
KDLTGSFVTILKQVVGGKLPVEFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLD
ESLRRAELNHNVTYAILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKAL
TYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNITVIVQKMLEYLHQS
KEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGFDD
ETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIAKLYKL
LMNDSVSSETKAWLIAAVTKLTSQAHSSNTVERLIHEFTISLDTCMRQHAFELKHLHENV
E
LMKSLLPVDRSCEDLVVDASLSFLDGFVAEGLSQGAAPYKPPHQRQEEKLSQEKVLNFE
PYGLSFSSSGFTGRQSPAGISLGSDVSGNSAETGLKETNSLKLEGIKKLWGKEGYLPKKE
SKTGDESGALPVPQESIMENVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTI
NLLGKADTVSHKFRRKSKVKEAKSGETTSTHNMTCSSFSSLSNVAYEDDYYSNTLHDTGD
KELKKFSLTSELLDSESLTELPLVEKFSYCSLSTPSLFANNNMEIFHPPQSTAASVAKES
SLASSFLEETTEYIHSNAMEVCNNETISVSSYKIWKDDCLLMVWSVTNKSGLELKSADLE
IFPAENFKVTEQPGCCLPVMEAESTKSFQYSVQIEKPFTEGNLTGFISYHMMDTHSAQLE
FSVNLSLLDFIRPLKISSDDFGKLWLSFANDVKQNVKMSESQAALPSALKTLQQKLRLHI
IEIIGNEGLLACQLLPSIPCLLHCRVHADVLALWFRSSCSTLPDYLLYQCQKV
MEGS
Sequence length 1137
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  Reactome
  Lysosome   Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis
Associated diseases Disease associations from ClinVar categorized as Causal (Pathogenic/Likely Pathogenic) or Unknown.
535
Causal Diseases associated with Pathogenic or Likely Pathogenic variants in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
Abnormality of the nervous system Likely pathogenic rs569567659 RCV001814369
ALG12-congenital disorder of glycosylation Pathogenic rs1313275799 RCV001333647
Developmental disorder Likely pathogenic rs2504643899 RCV003764459
Hereditary spastic paraplegia 51 Pathogenic; Likely pathogenic rs1313275799, rs2141164878, rs2141147450, rs2064899680, rs2504796812, rs2140861877, rs1567230528 RCV001779155
RCV001374659
RCV002266897
RCV002266440
RCV002290126
RCV000023638
RCV000785899
Unknown Diseases with uncertain, conflicting, or no pathogenic evidence in ClinVar
Phenotype Name Clinical Significance dbSNP ID RCV Accession
AP-4 deficiency syndrome Uncertain significance rs1195052914, rs2141120985, rs756542785 RCV006442482
RCV006442491
RCV006443784
AP4E1-related disorder Likely benign; Benign; Uncertain significance; Conflicting classifications of pathogenicity rs201935060, rs2063739492, rs116796602, rs75130619, rs115188375, rs147638518, rs369000416, rs768213913, rs1465935177, rs148817957, rs143027953, rs145541719, rs141278078, rs759539551, rs745897561
View all (4 more)
RCV003963260
RCV003965795
RCV003915137
RCV003925122
RCV003915138
RCV003395265
RCV003978819
RCV003909043
RCV003896595
RCV003924668
RCV003902750
RCV003942621
RCV003942622
RCV003932814
RCV003925597
RCV003915760
RCV004756040
RCV003955531
RCV003908155
RCV003975401
Clear cell carcinoma of kidney Conflicting classifications of pathogenicity rs142762839 RCV005901638
Congenital myopathy Conflicting classifications of pathogenicity rs773401224 RCV005622220
Associations from Text MiningDisease associations identified through Pubtator
Disease Name Relationship Type References
Agenesis of Corpus Callosum Associate 34006278
Alzheimer Disease Associate 33712570, 40691194
Bovine Respiratory Disease Complex Inhibit 21620353
Bovine Respiratory Disease Complex Associate 31915823
Cerebral Palsy Associate 20972249, 21620353
Developmental Disabilities Associate 34006278
Diabetes Mellitus Type 2 Associate 40596821
Epilepsy Associate 20972249, 32979048
Intellectual Disability Associate 20972249, 21620353, 34006278, 36226339
Invasive Pneumococcal Disease Recurrent Isolated 2 Associate 23472171