Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23431
Gene name Gene Name - the full gene name approved by the HGNC.
Adaptor related protein complex 4 subunit epsilon 1
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
AP4E1
Synonyms (NCBI Gene) Gene synonyms aliases
CPSQ4, SPG51, STUT1
Disease Acronyms (UniProt) Disease acronyms from UniProt database
SPG51, STUT1
Chromosome Chromosome number
15
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
15q21.2
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a member of the adaptor complexes large subunit protein family. These proteins are components of the heterotetrameric adaptor protein complexes, which play important roles in the secretory and endocytic pathways by mediating vesicle form
SNPs SNP information provided by dbSNP.
SNP ID Visualize variation Clinical significance Consequence
rs141278078 C>T Benign, conflicting-interpretations-of-pathogenicity Coding sequence variant, missense variant, non coding transcript variant, genic downstream transcript variant, intron variant
rs143624283 T>C Likely-benign, conflicting-interpretations-of-pathogenicity Non coding transcript variant, coding sequence variant, synonymous variant, 5 prime UTR variant
rs148817957 A>C,G Uncertain-significance, conflicting-interpretations-of-pathogenicity Missense variant, non coding transcript variant, coding sequence variant
rs556450190 G>A Pathogenic Coding sequence variant, non coding transcript variant, missense variant, genic downstream transcript variant
rs754944429 ->TATGT Pathogenic Non coding transcript variant, genic downstream transcript variant, coding sequence variant, frameshift variant
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT019500 hsa-miR-148b-3p Microarray 17612493
MIRT481815 hsa-miR-3936 PAR-CLIP 23592263
MIRT481814 hsa-miR-759 PAR-CLIP 23592263
MIRT481813 hsa-miR-922 PAR-CLIP 23592263
MIRT481812 hsa-miR-6773-3p PAR-CLIP 23592263
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 26542808
GO:0006605 Process Protein targeting IC 10066790
GO:0006898 Process Receptor-mediated endocytosis IBA 21873635
GO:0008104 Process Protein localization IC 10066790
GO:0030124 Component AP-4 adaptor complex IBA 21873635
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
607244 573 ENSG00000081014
Protein
UniProt ID Q9UPM8
Protein name AP-4 complex subunit epsilon-1 (AP-4 adaptor complex subunit epsilon) (Adaptor-related protein complex 4 subunit epsilon-1) (Epsilon subunit of AP-4) (Epsilon-adaptin)
Protein function Component of the adaptor protein complex 4 (AP-4). Adaptor protein complexes are vesicle coat components involved both in vesicle formation and cargo selection. They control the vesicular transport of proteins in different trafficking pathways (
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF01602 Adaptin_N 52 601 Adaptin N terminal region Family
PF14807 AP4E_app_platf 1033 1133 Adaptin AP4 complex epsilon appendage platform Domain
Tissue specificity TISSUE SPECIFICITY: Widely expressed. {ECO:0000269|PubMed:10436028}.
Sequence
MSDIVEKTLTALPGLFLQNQPGGGPAAAKASFSSRLGSLVRGITALTSKHEEEKLIQQEL
SSLKATVSAPTTTLKMMKECMVRLIYCEMLGYDASFGYIHAIKLAQQGNLLEKRVGYLAV
SLFLHESHELLLLLVNTVVKDLQSTNLVEVCMALTVVSQIFPCEMIPAVLPLIEDKLQHS
KEIVRRKAVLALYKFHLIAPNQVQHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSGY
KDLTGSFVTILKQVVGGKLPVEFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLD
ESLRRAELNHNVTYAILFECVHTVYSIYPKSELLEKAAKCIGKFVLSPKINLKYLGLKAL
TYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNITVIVQKMLEYLHQS
KEEYVIVNLVGKIAELAEKYAPDNAWFIQTMNAVFSVGGDVMHPDIPNNFLRLLAEGFDD
ETEDQQLRLYAVQSYLTLLDMENVFYPQRFLQVMSWVLGEYSYLLDKETPEEVIAKLYKL
LMNDSVSSETKAWLIAAVTKLTSQAHSSNTVERLIHEFTISLDTCMRQHAFELKHLHENV
E
LMKSLLPVDRSCEDLVVDASLSFLDGFVAEGLSQGAAPYKPPHQRQEEKLSQEKVLNFE
PYGLSFSSSGFTGRQSPAGISLGSDVSGNSAETGLKETNSLKLEGIKKLWGKEGYLPKKE
SKTGDESGALPVPQESIMENVDQAITKKDQSQVLTQSKEEKEKQLLASSLFVGLGSESTI
NLLGKADTVSHKFRRKSKVKEAKSGETTSTHNMTCSSFSSLSNVAYEDDYYSNTLHDTGD
KELKKFSLTSELLDSESLTELPLVEKFSYCSLSTPSLFANNNMEIFHPPQSTAASVAKES
SLASSFLEETTEYIHSNAMEVCNNETISVSSYKIWKDDCLLMVWSVTNKSGLELKSADLE
IFPAENFKVTEQPGCCLPVMEAESTKSFQYSVQIEKPFTEGNLTGFISYHMMDTHSAQLE
FSVNLSLLDFIRPLKISSDDFGKLWLSFANDVKQNVKMSESQAALPSALKTLQQKLRLHI
IEIIGNEGLLACQLLPSIPCLLHCRVHADVLALWFRSSCSTLPDYLLYQCQKV
MEGS
Sequence length 1137
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG   Reactome
  Lysosome   Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Developmental delay Global developmental delay rs28941770, rs199469464, rs281865469, rs143747297, rs398123009, rs587777428, rs786205133, rs606231459, rs797044854, rs797045027, rs864309504, rs878853160, rs886039902, rs886042046, rs886041291
View all (32 more)
Mental retardation Profound Mental Retardation, Severe intellectual disability, Mental deficiency, Intellectual Disability rs5742905, rs267607136, rs267607137, rs2131714307, rs267607038, rs267607042, rs80338685, rs137853127, rs80338815, rs28940893, rs387906309, rs121908096, rs121908099, rs587784365, rs121918315
View all (1024 more)
21937992
Microcephaly Microcephaly rs397704721, rs267607176, rs267607177, rs397704725, rs267606717, rs267606718, rs199422202, rs121434311, rs199422203, rs199422126, rs387906274, rs121434305, rs199422125, rs199422135, rs189678019
View all (280 more)
Hypotonia Neonatal Hypotonia rs141138948, rs397517172, rs869312824, rs1583169151
Unknown
Disease term Disease name Evidence References Source
Spastic Paraplegia hereditary spastic paraplegia 51 GenCC
Associations from Text Mining
Disease Name Relationship Type References
Agenesis of Corpus Callosum Associate 34006278
Alzheimer Disease Associate 33712570, 40691194
Bovine Respiratory Disease Complex Inhibit 21620353
Bovine Respiratory Disease Complex Associate 31915823
Cerebral Palsy Associate 20972249, 21620353
Developmental Disabilities Associate 34006278
Diabetes Mellitus Type 2 Associate 40596821
Epilepsy Associate 20972249, 32979048
Intellectual Disability Associate 20972249, 21620353, 34006278, 36226339
Invasive Pneumococcal Disease Recurrent Isolated 2 Associate 23472171