Gene
Entrez ID Entrez Gene ID - the GENE ID in NCBI Gene database.
23154
Gene name Gene Name - the full gene name approved by the HGNC.
Neurochondrin
Gene symbol Gene Symbol - the official gene symbol approved by the HGNC.
NCDN
Synonyms (NCBI Gene) Gene synonyms aliases
NEDIES
Disease Acronyms (UniProt) Disease acronyms from UniProt database
NEDIES
Chromosome Chromosome number
1
Chromosome location Chromosomal Location - indicates the cytogenetic location of the gene or region on the chromosome.
1p34.3
Summary Summary of gene provided in NCBI Entrez Gene.
This gene encodes a leucine-rich cytoplasmic protein, which is highly similar to a mouse protein that negatively regulates Ca/calmodulin-dependent protein kinase II phosphorylation and may be essential for spatial learning processes. Several alternatively
miRNA miRNA information provided by mirtarbase database.
miRTarBase ID miRNA Experiments Reference
MIRT023258 hsa-miR-122-5p Microarray 17612493
MIRT049742 hsa-miR-92a-3p CLASH 23622248
MIRT040919 hsa-miR-18a-3p CLASH 23622248
MIRT039427 hsa-miR-421 CLASH 23622248
MIRT608917 hsa-miR-331-3p HITS-CLIP 23313552
Gene ontology (GO) Gene ontology information of associated ontologies with gene provided by GO database.
GO ID Ontology Definition Evidence Reference
GO:0005515 Function Protein binding IPI 21044950, 25416956, 32296183
GO:0005634 Component Nucleus ISS
GO:0005829 Component Cytosol IDA 23687301
GO:0005829 Component Cytosol ISS
GO:0010008 Component Endosome membrane IEA
Other IDs Other ids provides unique ids of gene in databases such as OMIM, HGNC, ENSEMBLE.
MIM HGNC e!Ensembl
608458 17597 ENSG00000020129
Protein
UniProt ID Q9UBB6
Protein name Neurochondrin
Protein function Probably involved in signal transduction in the nervous system, via increasing cell surface localization of GRM5/mGluR5 and positively regulating its signaling (PubMed:33711248). Required for the spatial learning process. Acts as a negative regu
Family and domains

Pfam

Accession ID Position in sequence Description Type
PF05536 Neurochondrin 30 637 Neurochondrin Family
Tissue specificity TISSUE SPECIFICITY: Abundantly expressed in whole adult brain and in all individual brain regions examined, including spinal cord. Weakly expressed in ovary, testis, fetal brain and small intestine. {ECO:0000269|PubMed:10524216, ECO:0000269|PubMed:9628581
Sequence
Sequence length 729
Interactions View interactions
Pathways Pathway information has different metabolic/signaling pathways associated with genes.
  KEGG  
  Glutamatergic synapse  
Associated diseases Disease information provided by ClinVar, GenCC, and GWAS databases.
Causal
Disease term Disease name dbSNP ID References
Colorectal cancer Colorectal Carcinoma rs137854568, rs137854573, rs137854575, rs387906234, rs121908380, rs121908702, rs267606674, rs794729661, rs121909055, rs281865417, rs267606884, rs28934575, rs587776769, rs104893815, rs587776800
View all (467 more)
Unknown
Disease term Disease name Evidence References Source
Non-Syndromic Intellectual Disability autosomal recessive non-syndromic intellectual disability GenCC
Associations from Text Mining
Disease Name Relationship Type References
Autoimmune Diseases Associate 39376559
Delayed Cranial Ossification due to CBFB Haploinsufficiency Associate 35151370
Depressive Disorder Associate 33711248
Developmental Disabilities Associate 33711248
Epilepsy Associate 33711248
Frontotemporal Lobar Degeneration Associate 35151370
Glioblastoma Associate 34875133
Hypersensitivity Delayed Associate 33711248
Intellectual Disability Associate 33711248
Learning Disabilities Associate 33711248